Analysis of interatomic Contacts of Structural Units in PDB entry:
6BXT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BXT entry

There are 3 chains in PDB entry 6BXT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 162GLU 426
B
PRO 162GLU 426
C
PRO 162GLU 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6BXT. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
214 231Right-handed alpha
Helix 2
AA2
A
236 258Right-handed alpha
Helix 3
AA3
A
266 270Right-handed 310
Helix 4
AA4
A
290 295Right-handed alpha
Helix 5
AA5
A
308 318Right-handed 310
Helix 6
AA6
A
332 356Right-handed alpha
Helix 7
AA7
A
357 363Right-handed alpha
Helix 8
AA8
A
383 403Right-handed alpha
Helix 9
AA9
A
416 426Right-handed alpha
Helix 10
AB1
B
214 231Right-handed alpha
Helix 11
AB2
B
236 258Right-handed alpha
Helix 12
AB3
B
266 270Right-handed 310
Helix 13
AB4
B
290 295Right-handed alpha
Helix 14
AB5
B
311 318Right-handed 310
Helix 15
AB6
B
332 357Right-handed alpha
Helix 16
AB7
B
357 363Right-handed alpha
Helix 17
AB8
B
383 403Right-handed alpha
Helix 18
AB9
B
416 426Right-handed alpha
Helix 19
AC1
C
168 171Right-handed 310
Helix 20
AC2
C
214 228Right-handed alpha
Helix 21
AC3
C
236 258Right-handed alpha
Helix 22
AC4
C
266 271Right-handed 310
Helix 23
AC5
C
290 295Right-handed alpha
Helix 24
AC6
C
311 318Right-handed 310
Helix 25
AC7
C
332 357Right-handed alpha
Helix 26
AC8
C
357 363Right-handed alpha
Helix 27
AC9
C
383 403Right-handed alpha
Helix 28
AD1
C
416 426Right-handed alpha
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There are 3 sheets in PDB entry 6BXT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
163 167first strand
Strand 2
A
173 177anti-parallel
Strand 3
A
407 410parallel
Strand 4
A
367 370parallel
Strand 5
A
199 205parallel
Strand 6
A
320 325parallel
Strand 7
A
301 306anti-parallel
Strand 8
A
274 280anti-parallel
Strand 9
A
263 265anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
163 167first strand
Strand 2
B
173 177anti-parallel
Strand 3
B
407 410parallel
Strand 4
B
367 370parallel
Strand 5
B
199 204parallel
Strand 6
B
320 324parallel
Strand 7
B
301 306anti-parallel
Strand 8
B
274 280anti-parallel
Strand 9
B
262 265anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
163 167first strand
Strand 2
C
173 177anti-parallel
Strand 3
C
407 410parallel
Strand 4
C
367 370parallel
Strand 5
C
199 204parallel
Strand 6
C
320 324parallel
Strand 7
C
301 306anti-parallel
Strand 8
C
274 280anti-parallel
Strand 9
C
263 265anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il