Analysis of interatomic Contacts of Structural Units in PDB entry:
6BYO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BYO entry

There is 1 chain in PDB entry 6BYO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 32THR 1388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 6BYO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 49Right-handed alpha
Helix 2
AA2
A
52 68Right-handed alpha
Helix 3
AA3
A
81 108Right-handed alpha
Helix 4
AA4
A
115 120Right-handed alpha
Helix 5
AA5
A
120 134Right-handed alpha
Helix 6
AA6
A
166 170Right-handed 310
Helix 7
AA7
A
171 179Right-handed alpha
Helix 8
AA8
A
181 191Right-handed alpha
Helix 9
AA9
A
196 219Right-handed alpha
Helix 10
AB1
A
277 285Right-handed alpha
Helix 11
AB2
A
285 290Right-handed alpha
Helix 12
AB3
A
293 305Right-handed alpha
Helix 13
AB4
A
310 336Right-handed alpha
Helix 14
AB5
A
336 341Right-handed alpha
Helix 15
AB6
A
342 344Right-handed 310
Helix 16
AB7
A
346 375Right-handed alpha
Helix 17
AB8
A
419 428Right-handed alpha
Helix 18
AB9
A
432 449Right-handed alpha
Helix 19
AC1
A
458 485Right-handed alpha
Helix 20
AC2
A
487 494Right-handed alpha
Helix 21
AC3
A
494 517Right-handed alpha
Helix 22
AC4
A
520 532Right-handed alpha
Helix 23
AC5
A
533 541Right-handed 310
Helix 24
AC6
A
544 557Right-handed alpha
Helix 25
AC7
A
561 581Right-handed alpha
Helix 26
AC8
A
601 612Right-handed alpha
Helix 27
AC9
A
615 628Right-handed alpha
Helix 28
AD1
A
634 638Right-handed 310
Helix 29
AD2
A
639 651Right-handed alpha
Helix 30
AD3
A
654 663Right-handed alpha
Helix 31
AD4
A
665 669Right-handed 310
Helix 32
AD5
A
789 797Right-handed alpha
Helix 33
AD6
A
798 818Right-handed alpha
Helix 34
AD7
A
826 852Right-handed alpha
Helix 35
AD8
A
861 880Right-handed alpha
Helix 36
AD9
A
894 899Right-handed alpha
Helix 37
AE1
A
900 902Right-handed 310
Helix 38
AE2
A
903 909Right-handed alpha
Helix 39
AE3
A
913 950Right-handed alpha
Helix 40
AE4
A
999 1010Right-handed alpha
Helix 41
AE5
A
1015 1025Right-handed alpha
Helix 42
AE6
A
1038 1042Right-handed 310
Helix 43
AE7
A
1043 1073Right-handed alpha
Helix 44
AE8
A
1083 1093Right-handed alpha
Helix 45
AE9
A
1105 1116Right-handed alpha
Helix 46
AF1
A
1117 1125Right-handed alpha
Helix 47
AF2
A
1125 1137Right-handed alpha
Helix 48
AF3
A
1143 1173Right-handed alpha
Helix 49
AF4
A
1180 1204Right-handed alpha
Helix 50
AF5
A
1229 1235Right-handed 310
Helix 51
AF6
A
1236 1241Right-handed alpha
Helix 52
AF7
A
1242 1246Right-handed 310
Helix 53
AF8
A
1250 1264Right-handed alpha
Helix 54
AF9
A
1266 1289Right-handed alpha
Helix 55
AG1
A
1308 1321Right-handed alpha
Helix 56
AG2
A
1324 1332Right-handed alpha
Helix 57
AG3
A
1357 1383Right-handed alpha
Helix 58
AG4
A
1383 1388Right-handed alpha
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There are 2 sheets in PDB entry 6BYO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
955 957first strand
Strand 2
A
990 992anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
971 975first strand
Strand 2
A
983 987anti-parallel
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