Analysis of interatomic Contacts of Structural Units in PDB entry:
6BZ0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BZ0 entry

There are 3 chains in PDB entry 6BZ0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 4	ILE 472
B	GLN 4	ILE 472
C	PHE 5	GLY 366

There are 66 helices in PDB entry 6BZ0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	26	Right-handed alpha
Helix 2	AA2	A	45	52	Right-handed alpha
Helix 3	AA3	A	52	72	Right-handed alpha
Helix 4	AA4	A	73	76	Right-handed 310
Helix 5	AA5	A	86	112	Right-handed alpha
Helix 6	AA6	A	125	127	Right-handed 310
Helix 7	AA7	A	169	174	Right-handed alpha
Helix 8	AA8	A	189	202	Right-handed alpha
Helix 9	AA9	A	220	234	Right-handed alpha
Helix 10	AB1	A	317	320	Right-handed 310
Helix 11	AB2	A	325	341	Right-handed alpha
Helix 12	AB3	A	348	352	Right-handed 310
Helix 13	AB4	A	368	375	Right-handed alpha
Helix 14	AB5	A	389	396	Right-handed alpha
Helix 15	AB6	A	422	436	Right-handed alpha
Helix 16	AB7	A	439	445	Right-handed alpha
Helix 17	AB8	A	454	465	Right-handed alpha
Helix 18	AB9	B	13	26	Right-handed alpha
Helix 19	AC1	B	45	52	Right-handed alpha
Helix 20	AC2	B	52	72	Right-handed alpha
Helix 21	AC3	B	73	76	Right-handed 310
Helix 22	AC4	B	86	112	Right-handed alpha
Helix 23	AC5	B	125	127	Right-handed 310
Helix 24	AC6	B	169	174	Right-handed alpha
Helix 25	AC7	B	189	202	Right-handed alpha
Helix 26	AC8	B	220	235	Right-handed alpha
Helix 27	AC9	B	317	320	Right-handed 310
Helix 28	AD1	B	325	341	Right-handed alpha
Helix 29	AD2	B	368	375	Right-handed alpha
Helix 30	AD3	B	389	396	Right-handed alpha
Helix 31	AD4	B	422	436	Right-handed alpha
Helix 32	AD5	B	439	445	Right-handed alpha
Helix 33	AD6	B	454	465	Right-handed alpha
Helix 34	AD7	C	13	26	Right-handed alpha
Helix 35	AD8	C	45	51	Right-handed alpha
Helix 36	AD9	C	52	72	Right-handed alpha
Helix 37	AE1	C	73	76	Right-handed 310
Helix 38	AE2	C	86	112	Right-handed alpha
Helix 39	AE3	C	125	127	Right-handed 310
Helix 40	AE4	C	169	174	Right-handed alpha
Helix 41	AE5	C	189	202	Right-handed alpha
Helix 42	AE6	C	220	235	Right-handed alpha
Helix 43	AE7	C	317	320	Right-handed 310
Helix 44	AE8	C	325	341	Right-handed alpha
Helix 45	AE9	C	368	375	Right-handed alpha
Helix 46	AF1	C	389	396	Right-handed alpha
Helix 47	AF2	C	422	436	Right-handed alpha
Helix 48	AF3	C	439	445	Right-handed alpha
Helix 49	AF4	C	454	465	Right-handed alpha
Helix 50	AF5	D	13	26	Right-handed alpha
Helix 51	AF6	D	45	52	Right-handed alpha
Helix 52	AF7	D	52	72	Right-handed alpha
Helix 53	AF8	D	73	76	Right-handed 310
Helix 54	AF9	D	86	112	Right-handed alpha
Helix 55	AG1	D	125	127	Right-handed 310
Helix 56	AG2	D	169	174	Right-handed alpha
Helix 57	AG3	D	189	202	Right-handed alpha
Helix 58	AG4	D	220	235	Right-handed alpha
Helix 59	AG5	D	317	320	Right-handed 310
Helix 60	AG6	D	325	341	Right-handed alpha
Helix 61	AG7	D	348	352	Right-handed 310
Helix 62	AG8	D	368	375	Right-handed alpha
Helix 63	AG9	D	389	396	Right-handed alpha
Helix 64	AH1	D	422	436	Right-handed alpha
Helix 65	AH2	D	439	445	Right-handed alpha
Helix 66	AH3	D	454	466	Right-handed alpha

There are 28 sheets in PDB entry 6BZ0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	139	141	first strand
Strand 2	A	129	133	anti-parallel
Strand 3	A	115	123	anti-parallel
Strand 4	A	30	34	parallel
Strand 5	A	7	10	parallel
Strand 6	A	145	148	parallel
Strand 7	A	313	315	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	38	first strand
Strand 2	A	41	42	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	79	first strand
Strand 2	B	84	85	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	85	first strand
Strand 2	B	78	80	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	152	154	first strand
Strand 2	A	278	280	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	168	first strand
Strand 2	A	271	274	parallel
Strand 3	A	182	186	parallel
Strand 4	A	205	210	parallel
Strand 5	A	237	240	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	243	250	first strand
Strand 2	A	253	260	anti-parallel
Strand 3	A	263	269	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	356	first strand
Strand 2	A	361	366	anti-parallel
Strand 3	A	413	420	anti-parallel
Strand 4	A	401	407	anti-parallel
Strand 5	A	379	385	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	139	141	first strand
Strand 2	B	129	133	anti-parallel
Strand 3	B	115	123	anti-parallel
Strand 4	B	30	34	parallel
Strand 5	B	7	10	parallel
Strand 6	B	145	148	parallel
Strand 7	B	313	315	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	37	38	first strand
Strand 2	B	41	42	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	154	first strand
Strand 2	B	278	280	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	167	168	first strand
Strand 2	B	271	274	parallel
Strand 3	B	182	186	parallel
Strand 4	B	205	210	parallel
Strand 5	B	237	240	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	243	250	first strand
Strand 2	B	253	260	anti-parallel
Strand 3	B	263	269	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	356	first strand
Strand 2	B	361	366	anti-parallel
Strand 3	B	413	420	anti-parallel
Strand 4	B	401	407	anti-parallel
Strand 5	B	379	385	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	139	141	first strand
Strand 2	C	129	133	anti-parallel
Strand 3	C	115	123	anti-parallel
Strand 4	C	30	34	parallel
Strand 5	C	7	10	parallel
Strand 6	C	145	148	parallel
Strand 7	C	313	315	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	38	first strand
Strand 2	C	41	42	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	79	first strand
Strand 2	D	84	85	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	D	78	79	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	152	154	first strand
Strand 2	C	278	280	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	167	168	first strand
Strand 2	C	271	274	parallel
Strand 3	C	182	186	parallel
Strand 4	C	205	209	parallel
Strand 5	C	237	239	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	243	250	first strand
Strand 2	C	253	260	anti-parallel
Strand 3	C	263	269	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	294	295	first strand
Strand 2	C	299	300	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	356	first strand
Strand 2	C	361	366	anti-parallel
Strand 3	C	413	420	anti-parallel
Strand 4	C	401	407	anti-parallel
Strand 5	C	379	385	anti-parallel

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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	139	141	first strand
Strand 2	D	129	133	anti-parallel
Strand 3	D	115	123	anti-parallel
Strand 4	D	30	34	parallel
Strand 5	D	7	10	parallel
Strand 6	D	145	148	parallel
Strand 7	D	313	315	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	152	154	first strand
Strand 2	D	278	280	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	167	168	first strand
Strand 2	D	271	274	parallel
Strand 3	D	182	186	parallel
Strand 4	D	205	210	parallel
Strand 5	D	236	240	parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	243	250	first strand
Strand 2	D	253	260	anti-parallel
Strand 3	D	263	269	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	354	356	first strand
Strand 2	D	361	366	anti-parallel
Strand 3	D	413	420	anti-parallel
Strand 4	D	401	407	anti-parallel
Strand 5	D	379	385	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BZ0

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BZ0