Analysis of interatomic Contacts of Structural Units in PDB entry:
6BZA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BZA entry

There are 4 chains in PDB entry 6BZA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 2	LYS 501
B	ASN 2	LYS 501
C	ASN 2	VAL 502
D	ASN 2	LYS 501

There are 80 helices in PDB entry 6BZA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	25	Right-handed alpha
Helix 2	AA2	A	47	62	Right-handed alpha
Helix 3	AA3	A	63	68	Right-handed alpha
Helix 4	AA4	A	71	79	Right-handed alpha
Helix 5	AA5	A	119	134	Right-handed alpha
Helix 6	AA6	A	177	183	Right-handed alpha
Helix 7	AA7	A	207	212	Right-handed alpha
Helix 8	AA8	A	214	219	Right-handed alpha
Helix 9	AA9	A	270	282	Right-handed alpha
Helix 10	AB1	A	284	290	Right-handed 310
Helix 11	AB2	A	319	324	Right-handed alpha
Helix 12	AB3	A	328	330	Right-handed 310
Helix 13	AB4	A	331	355	Right-handed alpha
Helix 14	AB5	A	358	361	Right-handed 310
Helix 15	AB6	A	362	387	Right-handed alpha
Helix 16	AB7	A	389	422	Right-handed alpha
Helix 17	AB8	A	423	433	Right-handed alpha
Helix 18	AB9	A	444	464	Right-handed alpha
Helix 19	AC1	A	467	483	Right-handed alpha
Helix 20	AC2	B	12	25	Right-handed alpha
Helix 21	AC3	B	47	62	Right-handed alpha
Helix 22	AC4	B	63	68	Right-handed alpha
Helix 23	AC5	B	71	79	Right-handed alpha
Helix 24	AC6	B	119	134	Right-handed alpha
Helix 25	AC7	B	177	183	Right-handed alpha
Helix 26	AC8	B	207	212	Right-handed alpha
Helix 27	AC9	B	214	219	Right-handed alpha
Helix 28	AD1	B	270	282	Right-handed alpha
Helix 29	AD2	B	282	287	Right-handed alpha
Helix 30	AD3	B	288	290	Right-handed 310
Helix 31	AD4	B	319	324	Right-handed alpha
Helix 32	AD5	B	331	355	Right-handed alpha
Helix 33	AD6	B	358	361	Right-handed 310
Helix 34	AD7	B	362	387	Right-handed alpha
Helix 35	AD8	B	389	422	Right-handed alpha
Helix 36	AD9	B	423	433	Right-handed alpha
Helix 37	AE1	B	444	464	Right-handed alpha
Helix 38	AE2	B	467	483	Right-handed alpha
Helix 39	AE3	B	484	486	Right-handed 310
Helix 40	AE4	C	12	25	Right-handed alpha
Helix 41	AE5	C	47	61	Right-handed alpha
Helix 42	AE6	C	63	69	Right-handed alpha
Helix 43	AE7	C	71	79	Right-handed alpha
Helix 44	AE8	C	119	134	Right-handed alpha
Helix 45	AE9	C	177	183	Right-handed alpha
Helix 46	AF1	C	207	212	Right-handed alpha
Helix 47	AF2	C	214	219	Right-handed alpha
Helix 48	AF3	C	270	282	Right-handed alpha
Helix 49	AF4	C	282	287	Right-handed alpha
Helix 50	AF5	C	288	290	Right-handed 310
Helix 51	AF6	C	319	324	Right-handed alpha
Helix 52	AF7	C	328	330	Right-handed 310
Helix 53	AF8	C	331	355	Right-handed alpha
Helix 54	AF9	C	358	361	Right-handed 310
Helix 55	AG1	C	362	387	Right-handed alpha
Helix 56	AG2	C	389	422	Right-handed alpha
Helix 57	AG3	C	423	433	Right-handed alpha
Helix 58	AG4	C	444	464	Right-handed alpha
Helix 59	AG5	C	467	483	Right-handed alpha
Helix 60	AG6	C	484	486	Right-handed 310
Helix 61	AG7	D	12	25	Right-handed alpha
Helix 62	AG8	D	47	61	Right-handed alpha
Helix 63	AG9	D	63	69	Right-handed alpha
Helix 64	AH1	D	71	79	Right-handed alpha
Helix 65	AH2	D	119	134	Right-handed alpha
Helix 66	AH3	D	177	184	Right-handed alpha
Helix 67	AH4	D	207	212	Right-handed alpha
Helix 68	AH5	D	214	219	Right-handed alpha
Helix 69	AH6	D	223	227	Right-handed 310
Helix 70	AH7	D	270	282	Right-handed alpha
Helix 71	AH8	D	284	289	Right-handed 310
Helix 72	AH9	D	319	324	Right-handed alpha
Helix 73	AI1	D	331	355	Right-handed alpha
Helix 74	AI2	D	358	361	Right-handed 310
Helix 75	AI3	D	362	387	Right-handed alpha
Helix 76	AI4	D	389	422	Right-handed alpha
Helix 77	AI5	D	423	433	Right-handed alpha
Helix 78	AI6	D	444	465	Right-handed alpha
Helix 79	AI7	D	467	483	Right-handed alpha
Helix 80	AI8	D	484	486	Right-handed 310

There are 20 sheets in PDB entry 6BZA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	137	139	first strand
Strand 2	A	29	32	parallel
Strand 3	A	4	9	parallel
Strand 4	A	161	171	parallel
Strand 5	A	154	158	anti-parallel
Strand 6	A	144	149	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	137	139	first strand
Strand 2	A	29	32	parallel
Strand 3	A	4	9	parallel
Strand 4	A	161	171	parallel
Strand 5	A	316	318	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	106	107	first strand
Strand 2	A	84	94	anti-parallel
Strand 3	A	228	233	parallel
Strand 4	A	236	242	anti-parallel
Strand 5	A	254	261	anti-parallel
Strand 6	A	195	203	anti-parallel
Strand 7	A	293	294	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	118	first strand
Strand 2	A	84	94	anti-parallel
Strand 3	A	228	233	parallel
Strand 4	A	236	242	anti-parallel
Strand 5	A	254	261	anti-parallel
Strand 6	A	195	203	anti-parallel
Strand 7	A	299	301	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	187	first strand
Strand 2	A	307	308	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	137	139	first strand
Strand 2	B	29	32	parallel
Strand 3	B	4	9	parallel
Strand 4	B	164	171	parallel
Strand 5	B	154	158	anti-parallel
Strand 6	B	144	149	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	137	139	first strand
Strand 2	B	29	32	parallel
Strand 3	B	4	9	parallel
Strand 4	B	164	171	parallel
Strand 5	B	316	318	parallel
Strand 6	B	312	313	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	107	first strand
Strand 2	B	84	94	anti-parallel
Strand 3	B	228	233	parallel
Strand 4	B	236	242	anti-parallel
Strand 5	B	254	261	anti-parallel
Strand 6	B	195	203	anti-parallel
Strand 7	B	293	294	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	118	first strand
Strand 2	B	84	94	anti-parallel
Strand 3	B	228	233	parallel
Strand 4	B	236	242	anti-parallel
Strand 5	B	254	261	anti-parallel
Strand 6	B	195	203	anti-parallel
Strand 7	B	299	301	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	187	first strand
Strand 2	B	307	308	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	137	140	first strand
Strand 2	C	29	33	parallel
Strand 3	C	4	9	parallel
Strand 4	C	164	171	parallel
Strand 5	C	154	158	anti-parallel
Strand 6	C	144	149	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	137	140	first strand
Strand 2	C	29	33	parallel
Strand 3	C	4	9	parallel
Strand 4	C	164	171	parallel
Strand 5	C	316	318	parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	106	107	first strand
Strand 2	C	84	94	anti-parallel
Strand 3	C	228	233	parallel
Strand 4	C	236	242	anti-parallel
Strand 5	C	254	261	anti-parallel
Strand 6	C	195	203	anti-parallel
Strand 7	C	293	294	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	118	first strand
Strand 2	C	84	94	anti-parallel
Strand 3	C	228	233	parallel
Strand 4	C	236	242	anti-parallel
Strand 5	C	254	261	anti-parallel
Strand 6	C	195	203	anti-parallel
Strand 7	C	299	301	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	187	first strand
Strand 2	C	307	308	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	137	139	first strand
Strand 2	D	29	32	parallel
Strand 3	D	6	9	parallel
Strand 4	D	168	171	parallel
Strand 5	D	316	318	parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	106	107	first strand
Strand 2	D	84	94	anti-parallel
Strand 3	D	228	233	parallel
Strand 4	D	236	242	anti-parallel
Strand 5	D	254	261	anti-parallel
Strand 6	D	195	203	anti-parallel
Strand 7	D	293	294	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	110	118	first strand
Strand 2	D	84	94	anti-parallel
Strand 3	D	228	233	parallel
Strand 4	D	236	242	anti-parallel
Strand 5	D	254	261	anti-parallel
Strand 6	D	195	203	anti-parallel
Strand 7	D	299	301	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	144	149	first strand
Strand 2	D	154	158	anti-parallel
Strand 3	D	164	166	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	187	first strand
Strand 2	D	307	308	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BZA

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BZA