Analysis of interatomic Contacts of Structural Units in PDB entry:
6BZF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BZF entry

There are 21 chains in PDB entry 6BZF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	VAL 23
A	CYS 25	GLU 198
B	GLU 499	LEU 520
B	LYS 522	TRP 599
B	ILE 601	MET 626
B	TYR 628	ARG 662
B	ILE 664	TRP 704
C	TYR -4	GLU 198
D	GLU 499	LEU 520
D	LYS 522	ASP 567
D	ALA 569	TRP 599
D	ILE 601	MET 626
D	TYR 628	ARG 662
D	ILE 664	TRP 704
E	HIS -8	VAL 23
E	CYS 25	ASN 197
F	GLU 499	LEU 520
F	LYS 522	TYR 548
F	ILE 550	TRP 599
F	ILE 601	TRP 704
G	HIS -9	VAL 8

There are 83 helices in PDB entry 6BZF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	41	Right-handed alpha
Helix 2	AA2	A	43	69	Right-handed alpha
Helix 3	AA3	A	90	105	Right-handed alpha
Helix 4	AA4	A	107	112	Right-handed alpha
Helix 5	AA5	A	124	132	Right-handed alpha
Helix 6	AA6	A	132	147	Right-handed alpha
Helix 7	AA7	A	156	172	Right-handed alpha
Helix 8	AA8	A	175	186	Right-handed alpha
Helix 9	AA9	A	188	198	Right-handed alpha
Helix 10	AB1	B	513	521	Right-handed alpha
Helix 11	AB2	B	553	555	Right-handed 310
Helix 12	AB3	B	566	577	Right-handed alpha
Helix 13	AB4	B	588	594	Right-handed alpha
Helix 14	AB5	B	595	605	Right-handed alpha
Helix 15	AB6	B	618	634	Right-handed alpha
Helix 16	AB7	B	644	654	Right-handed alpha
Helix 17	AB8	B	657	668	Right-handed alpha
Helix 18	AB9	B	669	679	Right-handed alpha
Helix 19	AC1	B	681	686	Right-handed alpha
Helix 20	AC2	B	689	702	Right-handed alpha
Helix 21	AC3	C	30	41	Right-handed alpha
Helix 22	AC4	C	43	69	Right-handed alpha
Helix 23	AC5	C	90	103	Right-handed alpha
Helix 24	AC6	C	107	112	Right-handed alpha
Helix 25	AC7	C	124	132	Right-handed alpha
Helix 26	AC8	C	132	148	Right-handed alpha
Helix 27	AC9	C	156	172	Right-handed alpha
Helix 28	AD1	C	175	177	Right-handed 310
Helix 29	AD2	C	178	186	Right-handed alpha
Helix 30	AD3	C	188	198	Right-handed alpha
Helix 31	AD4	D	508	510	Right-handed 310
Helix 32	AD5	D	513	521	Right-handed alpha
Helix 33	AD6	D	553	555	Right-handed 310
Helix 34	AD7	D	566	577	Right-handed alpha
Helix 35	AD8	D	588	594	Right-handed alpha
Helix 36	AD9	D	595	606	Right-handed alpha
Helix 37	AE1	D	618	634	Right-handed alpha
Helix 38	AE2	D	644	654	Right-handed alpha
Helix 39	AE3	D	657	668	Right-handed alpha
Helix 40	AE4	D	669	679	Right-handed alpha
Helix 41	AE5	D	681	686	Right-handed alpha
Helix 42	AE6	D	689	702	Right-handed alpha
Helix 43	AE7	E	-7	-3	Right-handed alpha
Helix 44	AE8	E	30	41	Right-handed alpha
Helix 45	AE9	E	46	69	Right-handed alpha
Helix 46	AF1	E	90	106	Right-handed alpha
Helix 47	AF2	E	124	132	Right-handed alpha
Helix 48	AF3	E	132	141	Right-handed alpha
Helix 49	AF4	E	156	172	Right-handed alpha
Helix 50	AF5	E	182	186	Right-handed 310
Helix 51	AF6	E	188	196	Right-handed alpha
Helix 52	AF7	F	508	510	Right-handed 310
Helix 53	AF8	F	513	521	Right-handed alpha
Helix 54	AF9	F	553	555	Right-handed 310
Helix 55	AG1	F	566	577	Right-handed alpha
Helix 56	AG2	F	587	594	Right-handed alpha
Helix 57	AG3	F	596	605	Right-handed alpha
Helix 58	AG4	F	618	634	Right-handed alpha
Helix 59	AG5	F	644	653	Right-handed alpha
Helix 60	AG6	F	657	668	Right-handed alpha
Helix 61	AG7	F	669	679	Right-handed alpha
Helix 62	AG8	F	681	686	Right-handed alpha
Helix 63	AG9	F	689	702	Right-handed alpha
Helix 64	AH1	G	-8	-4	Right-handed 310
Helix 65	AH2	G	30	41	Right-handed alpha
Helix 66	AH3	G	43	69	Right-handed alpha
Helix 67	AH4	G	90	104	Right-handed alpha
Helix 68	AH5	G	107	112	Right-handed alpha
Helix 69	AH6	G	125	131	Right-handed alpha
Helix 70	AH7	G	156	172	Right-handed alpha
Helix 71	AH8	G	188	197	Right-handed alpha
Helix 72	AH9	H	508	512	Right-handed 310
Helix 73	AI1	H	513	521	Right-handed alpha
Helix 74	AI2	H	553	555	Right-handed 310
Helix 75	AI3	H	566	577	Right-handed alpha
Helix 76	AI4	H	587	594	Right-handed alpha
Helix 77	AI5	H	596	606	Right-handed alpha
Helix 78	AI6	H	618	634	Right-handed alpha
Helix 79	AI7	H	646	654	Right-handed alpha
Helix 80	AI8	H	657	668	Right-handed alpha
Helix 81	AI9	H	669	679	Right-handed alpha
Helix 82	AJ1	H	681	686	Right-handed alpha
Helix 83	AJ2	H	689	702	Right-handed alpha

There are 8 sheets in PDB entry 6BZF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	7	13	first strand
Strand 2	A	21	29	anti-parallel
Strand 3	A	77	84	parallel
Strand 4	A	114	119	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	526	531	first strand
Strand 2	B	501	506	parallel
Strand 3	B	539	542	anti-parallel
Strand 4	B	545	551	anti-parallel
Strand 5	B	579	586	parallel
Strand 6	B	610	616	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	7	14	first strand
Strand 2	C	21	29	anti-parallel
Strand 3	C	77	84	parallel
Strand 4	C	114	119	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	526	531	first strand
Strand 2	D	501	506	parallel
Strand 3	D	539	542	anti-parallel
Strand 4	D	545	551	anti-parallel
Strand 5	D	579	586	parallel
Strand 6	D	610	616	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	7	13	first strand
Strand 2	E	21	29	anti-parallel
Strand 3	E	77	84	parallel
Strand 4	E	114	119	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	526	531	first strand
Strand 2	F	501	506	parallel
Strand 3	F	539	542	anti-parallel
Strand 4	F	545	551	anti-parallel
Strand 5	F	579	585	parallel
Strand 6	F	610	615	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	7	14	first strand
Strand 2	G	21	29	anti-parallel
Strand 3	G	77	84	parallel
Strand 4	G	114	119	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	526	531	first strand
Strand 2	H	501	506	parallel
Strand 3	H	539	542	anti-parallel
Strand 4	H	545	551	anti-parallel
Strand 5	H	579	586	parallel
Strand 6	H	610	616	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BZF

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BZF