Analysis of interatomic Contacts of Structural Units in PDB entry:
6C10


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C10 entry

There is 1 chain in PDB entry 6C10 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1144ARG 1387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6C10. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1193 1197Right-handed 310
Helix 2
AA2
A
1232 1235Right-handed 310
Helix 3
AA3
A
1249 1253Right-handed 310
Helix 4
AA4
A
1261 1268Right-handed alpha
Helix 5
AA5
A
1268 1284Right-handed alpha
Helix 6
AA6
A
1300 1304Right-handed 310
Helix 7
AA7
A
1327 1337Right-handed alpha
Helix 8
AA8
A
1338 1351Right-handed alpha
Helix 9
AA9
A
1362 1371Right-handed alpha
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There are 5 sheets in PDB entry 6C10. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1147 1149first strand
Strand 2
A
1173 1175anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1153 1159first strand
Strand 2
A
1238 1248parallel
Strand 3
A
1222 1230anti-parallel
Strand 4
A
1185 1189anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1167 1170first strand
Strand 2
A
1208 1211anti-parallel
Strand 3
A
1200 1202anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1288 1299first strand
Strand 2
A
1305 1318anti-parallel
Strand 3
A
1254 1258anti-parallel
Strand 4
A
1356 1360anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1375 1376first strand
Strand 2
A
1385 1386anti-parallel
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