Analysis of interatomic Contacts of Structural Units in PDB entry:
6C15


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C15 entry

There are 2 chains in PDB entry 6C15 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 7PRO 283
B
 THR 9ASP 108
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6C15. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 56Right-handed 310
Helix 2
AA2
A
59 86Right-handed alpha
Helix 3
AA3
A
137 151Right-handed alpha
Helix 4
AA4
A
154 165Right-handed alpha
Helix 5
AA5
A
165 178Right-handed alpha
Helix 6
AA6
A
178 183Right-handed alpha
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There are 7 sheets in PDB entry 6C15. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 49first strand
Strand 2
A
35 41anti-parallel
Strand 3
A
24 32anti-parallel
Strand 4
A
9 18anti-parallel
Strand 5
A
94 103anti-parallel
Strand 6
A
111 118anti-parallel
Strand 7
A
122 127anti-parallel
Strand 8
A
130 133anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 196first strand
Strand 2
A
202 212anti-parallel
Strand 3
A
244 253anti-parallel
Strand 4
A
232 233anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 196first strand
Strand 2
A
202 212anti-parallel
Strand 3
A
244 253anti-parallel
Strand 4
A
237 238anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 227first strand
Strand 2
A
217 223anti-parallel
Strand 3
A
260 266anti-parallel
Strand 4
A
274 278anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 21first strand
Strand 2
B
31 40anti-parallel
Strand 3
B
72 80anti-parallel
Strand 4
B
60 61anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 21first strand
Strand 2
B
31 40anti-parallel
Strand 3
B
72 80anti-parallel
Strand 4
B
65 66anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 55first strand
Strand 2
B
46 51anti-parallel
Strand 3
B
88 93anti-parallel
Strand 4
B
101 104anti-parallel
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