Analysis of interatomic Contacts of Structural Units in PDB entry:
6C16


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C16 entry

There are 6 chains in PDB entry 6C16 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0LYS 155
B
 ALA 0ASN 157
C
 TRP 892ASP 926
D
 MET 1PHE 73
F
 GLU 890LEU 929
H
 SER -1PHE 73
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6C16. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 22Right-handed alpha
Helix 2
AA2
A
24 31Right-handed alpha
Helix 3
AA3
A
51 65Right-handed alpha
Helix 4
AA4
A
86 93Right-handed alpha
Helix 5
AA5
A
96 110Right-handed alpha
Helix 6
AA6
A
112 128Right-handed alpha
Helix 7
AA7
A
131 140Right-handed alpha
Helix 8
AA8
A
146 155Right-handed alpha
Helix 9
AA9
B
18 22Right-handed alpha
Helix 10
AB1
B
24 31Right-handed alpha
Helix 11
AB2
B
51 65Right-handed alpha
Helix 12
AB3
B
86 93Right-handed alpha
Helix 13
AB4
B
96 110Right-handed alpha
Helix 14
AB5
B
112 128Right-handed alpha
Helix 15
AB6
B
131 140Right-handed alpha
Helix 16
AB7
B
147 157Right-handed alpha
Helix 17
AB8
C
893 905Right-handed alpha
Helix 18
AB9
C
906 914Right-handed alpha
Helix 19
AC1
C
917 925Right-handed alpha
Helix 20
AC2
D
22 32Right-handed alpha
Helix 21
AC3
D
57 61Right-handed 310
Helix 22
AC4
F
893 903Right-handed alpha
Helix 23
AC5
F
906 914Right-handed alpha
Helix 24
AC6
F
917 925Right-handed alpha
Helix 25
AC7
H
22 34Right-handed alpha
Helix 26
AC8
H
37 39Right-handed 310
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There are 6 sheets in PDB entry 6C16. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 16first strand
Strand 2
A
4 7anti-parallel
Strand 3
A
45 46parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 17first strand
Strand 2
B
3 7anti-parallel
Strand 3
B
45 46parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 6first strand
Strand 2
D
12 16anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
48 49first strand
Strand 2
D
41 45anti-parallel
Strand 3
D
68 71anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
1 6first strand
Strand 2
H
12 17anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
41 44first strand
Strand 2
H
68 71anti-parallel
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