Analysis of interatomic Contacts of Structural Units in PDB entry:
6C1Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C1Q entry

There are 5 chains in PDB entry 6C1Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASP 11TRP 229
B
 GLN 231THR 410
L
 PHE 1PHE 1
L
 PRO 3PRO 3
L
 TRP 5ARG 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6C1Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
11 28Right-handed alpha
Helix 2
AA2
B
31 49Right-handed alpha
Helix 3
AA3
B
65 91Right-handed alpha
Helix 4
AA4
B
92 114Right-handed alpha
Helix 5
AA5
B
120 151Right-handed alpha
Helix 6
AA6
B
155 173Right-handed alpha
Helix 7
AA7
B
174 184Right-handed alpha
Helix 8
AA8
B
191 198Right-handed alpha
Helix 9
AA9
B
200 226Right-handed alpha
Helix 10
AB1
B
226 233Right-handed alpha
Helix 11
AB2
B
235 260Right-handed alpha
Helix 12
AB3
B
281 297Right-handed alpha
Helix 13
AB4
B
297 317Right-handed alpha
Helix 14
AB5
B
324 353Right-handed alpha
Helix 15
AB6
B
358 377Right-handed alpha
Helix 16
AB7
B
377 392Right-handed alpha
Helix 17
AB8
B
401 409Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6C1Q.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 266first strand
Strand 2
B
271 276anti-parallel
Strand 3
L
2 3anti-parallel
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