Analysis of interatomic Contacts of Structural Units in PDB entry:
6C2W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C2W entry

There are 16 chains in PDB entry 6C2W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1LEU 5
A
 VAL 8LEU 13
A
 ARG 15ARG 15
A
 CYS 17VAL 18
A
 THR 21TYR 24
A
 ALA 27PHE 28
A
 ALA 30LEU 31
A
 SER 33GLU 582
B
 ALA 1LEU 5
B
 VAL 8LEU 13
B
 ARG 15ARG 15
B
 CYS 17VAL 18
B
 THR 21TYR 24
B
 ALA 27PHE 28
B
 ALA 30LEU 31
B
 SER 33GLU 582
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6C2W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 17Right-handed alpha
Helix 2
AA2
A
23 28Right-handed alpha
Helix 3
AA3
A
35 47Right-handed alpha
Helix 4
AA4
A
53 58Right-handed alpha
Helix 5
AA5
A
172 176Right-handed 310
Helix 6
AA6
A
306 310Right-handed 310
Helix 7
AA7
A
367 371Right-handed 310
Helix 8
AA8
A
442 450Right-handed alpha
Helix 9
AA9
A
462 469Right-handed alpha
Helix 10
AB1
A
489 497Right-handed alpha
Helix 11
AB2
A
548 553Right-handed alpha
Helix 12
AB3
A
567 581Right-handed alpha
Helix 13
AB4
B
9 17Right-handed alpha
Helix 14
AB5
B
23 28Right-handed alpha
Helix 15
AB6
B
35 47Right-handed alpha
Helix 16
AB7
B
53 58Right-handed alpha
Helix 17
AB8
B
308 312Right-handed 310
Helix 18
AB9
B
367 371Right-handed 310
Helix 19
AC1
B
442 450Right-handed alpha
Helix 20
AC2
B
462 469Right-handed alpha
Helix 21
AC3
B
489 497Right-handed alpha
Helix 22
AC4
B
548 553Right-handed alpha
Helix 23
AC5
B
567 581Right-handed alpha
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There are 9 sheets in PDB entry 6C2W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 127first strand
Strand 2
A
135 137anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 232first strand
Strand 2
A
240 243anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 399first strand
Strand 2
A
380 383anti-parallel
Strand 3
A
336 339anti-parallel
Strand 4
A
349 352anti-parallel
Strand 5
A
358 360anti-parallel
Strand 6
A
421 423anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
481 485first strand
Strand 2
A
456 460anti-parallel
Strand 3
A
528 532anti-parallel
Strand 4
A
539 545anti-parallel
Strand 5
A
558 561anti-parallel
Strand 6
A
505 508anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 127first strand
Strand 2
B
135 137anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 232first strand
Strand 2
B
240 243anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
325 326first strand
Strand 2
B
481 485anti-parallel
Strand 3
B
456 460anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
397 399first strand
Strand 2
B
380 383anti-parallel
Strand 3
B
335 340anti-parallel
Strand 4
B
345 352anti-parallel
Strand 5
B
358 361anti-parallel
Strand 6
B
420 423anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
505 508first strand
Strand 2
B
558 561anti-parallel
Strand 3
B
544 545anti-parallel
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