Analysis of interatomic Contacts of Structural Units in PDB entry:
6C3D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C3D entry

There are 2 chains in PDB entry 6C3D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 14ARG 390
B
 LEU 14HIS 391
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 6C3D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 24Right-handed alpha
Helix 2
AA2
A
40 49Right-handed alpha
Helix 3
AA3
A
49 60Right-handed alpha
Helix 4
AA4
A
61 77Right-handed alpha
Helix 5
AA5
A
79 86Right-handed alpha
Helix 6
AA6
A
93 108Right-handed alpha
Helix 7
AA7
A
119 128Right-handed alpha
Helix 8
AA8
A
139 142Right-handed 310
Helix 9
AA9
A
143 145Right-handed 310
Helix 10
AB1
A
146 155Right-handed alpha
Helix 11
AB2
A
172 177Right-handed 310
Helix 12
AB3
A
178 191Right-handed alpha
Helix 13
AB4
A
201 206Right-handed 310
Helix 14
AB5
A
215 224Right-handed alpha
Helix 15
AB6
A
250 265Right-handed alpha
Helix 16
AB7
A
269 287Right-handed alpha
Helix 17
AB8
A
288 307Right-handed alpha
Helix 18
AB9
A
333 344Right-handed alpha
Helix 19
AC1
A
352 355Right-handed 310
Helix 20
AC2
A
358 363Right-handed 310
Helix 21
AC3
A
373 389Right-handed alpha
Helix 22
AC4
B
15 24Right-handed alpha
Helix 23
AC5
B
40 49Right-handed alpha
Helix 24
AC6
B
49 60Right-handed alpha
Helix 25
AC7
B
61 77Right-handed alpha
Helix 26
AC8
B
79 86Right-handed alpha
Helix 27
AC9
B
93 109Right-handed alpha
Helix 28
AD1
B
119 129Right-handed alpha
Helix 29
AD2
B
139 142Right-handed 310
Helix 30
AD3
B
143 145Right-handed 310
Helix 31
AD4
B
146 155Right-handed alpha
Helix 32
AD5
B
172 177Right-handed 310
Helix 33
AD6
B
178 191Right-handed alpha
Helix 34
AD7
B
201 206Right-handed 310
Helix 35
AD8
B
215 224Right-handed alpha
Helix 36
AD9
B
253 265Right-handed alpha
Helix 37
AE1
B
269 287Right-handed alpha
Helix 38
AE2
B
288 307Right-handed alpha
Helix 39
AE3
B
333 344Right-handed alpha
Helix 40
AE4
B
352 355Right-handed 310
Helix 41
AE5
B
358 363Right-handed 310
Helix 42
AE6
B
373 390Right-handed alpha
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There are 6 sheets in PDB entry 6C3D. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
346 347parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 91first strand
Strand 2
A
245 249anti-parallel
Strand 3
A
226 232anti-parallel
Strand 4
A
194 198parallel
Strand 5
A
159 163parallel
Strand 6
A
112 116parallel
Strand 7
A
133 137parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 313first strand
Strand 2
A
322 327anti-parallel
Strand 3
A
365 369anti-parallel
Strand 4
A
349 350anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 29first strand
Strand 2
B
346 347parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 91first strand
Strand 2
B
245 249anti-parallel
Strand 3
B
227 232anti-parallel
Strand 4
B
194 198parallel
Strand 5
B
159 163parallel
Strand 6
B
112 116parallel
Strand 7
B
133 137parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
311 313first strand
Strand 2
B
322 327anti-parallel
Strand 3
B
365 369anti-parallel
Strand 4
B
349 350anti-parallel
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