Analysis of interatomic Contacts of Structural Units in PDB entry:
6C4G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C4G entry

There is 1 chain in PDB entry 6C4G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 45PRO 470
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6C4G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
105 109Right-handed 310
Helix 2
AA2
A
122 126Right-handed 310
Helix 3
AA3
A
178 183Right-handed alpha
Helix 4
AA4
A
201 209Right-handed alpha
Helix 5
AA5
A
234 238Right-handed 310
Helix 6
AA6
A
322 336Right-handed alpha
Helix 7
AA7
A
343 352Right-handed alpha
Helix 8
AA8
A
354 358Right-handed 310
Helix 9
AA9
A
364 379Right-handed alpha
Helix 10
AB1
A
414 418Right-handed alpha
Helix 11
AB2
A
441 446Right-handed alpha
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There are 6 sheets in PDB entry 6C4G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 280first strand
Strand 2
A
458 463anti-parallel
Strand 3
A
448 453anti-parallel
Strand 4
A
216 221anti-parallel
Strand 5
A
226 230anti-parallel
Strand 6
A
48 55anti-parallel
Strand 7
A
61 68anti-parallel
Strand 8
A
73 80anti-parallel
Strand 9
A
187 190parallel
Strand 10
A
86 89anti-parallel
Strand 11
A
163 175parallel
Strand 12
A
144 157anti-parallel
Strand 13
A
113 114anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 280first strand
Strand 2
A
458 463anti-parallel
Strand 3
A
448 453anti-parallel
Strand 4
A
216 221anti-parallel
Strand 5
A
226 230anti-parallel
Strand 6
A
48 55anti-parallel
Strand 7
A
61 68anti-parallel
Strand 8
A
144 157anti-parallel
Strand 9
A
132 138anti-parallel
Strand 10
A
128 129anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 291first strand
Strand 2
A
308 312anti-parallel
Strand 3
A
439 440parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 300first strand
Strand 2
A
293 296anti-parallel
Strand 3
A
401 404anti-parallel
Strand 4
A
410 413anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 321first strand
Strand 2
A
430 432parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 385first strand
Strand 2
A
389 392anti-parallel
Strand 3
A
425 428anti-parallel
Strand 4
A
419 422anti-parallel
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