Analysis of interatomic Contacts of Structural Units in PDB entry:
6C4P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C4P entry

There is 1 chain in PDB entry 6C4P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 5PHE 348
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6C4P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 18Right-handed 310
Helix 2
AA2
A
28 33Right-handed alpha
Helix 3
AA3
A
45 47Right-handed 310
Helix 4
AA4
A
53 67Right-handed alpha
Helix 5
AA5
A
83 97Right-handed alpha
Helix 6
AA6
A
109 119Right-handed alpha
Helix 7
AA7
A
137 147Right-handed alpha
Helix 8
AA8
A
161 170Right-handed alpha
Helix 9
AA9
A
170 182Right-handed alpha
Helix 10
AB1
A
198 212Right-handed alpha
Helix 11
AB2
A
230 235Right-handed 310
Helix 12
AB3
A
256 260Right-handed 310
Helix 13
AB4
A
267 283Right-handed alpha
Helix 14
AB5
A
287 304Right-handed alpha
Helix 15
AB6
A
320 325Right-handed 310
Helix 16
AB7
A
330 337Right-handed alpha
Helix 17
AB8
A
341 346Right-handed 310
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There are 2 sheets in PDB entry 6C4P. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
38 43anti-parallel
Strand 3
A
312 317parallel
Strand 4
A
188 194parallel
Strand 5
A
216 222parallel
Strand 6
A
262 266parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 126first strand
Strand 2
A
99 105parallel
Strand 3
A
76 80parallel
Strand 4
A
152 153parallel
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