Analysis of interatomic Contacts of Structural Units in PDB entry:
6C4T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C4T entry

There is 1 chain in PDB entry 6C4T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 428
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6C4T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 24Right-handed alpha
Helix 2
AA2
A
37 51Right-handed alpha
Helix 3
AA3
A
76 80Right-handed 310
Helix 4
AA4
A
92 94Right-handed 310
Helix 5
AA5
A
95 102Right-handed alpha
Helix 6
AA6
A
104 111Right-handed alpha
Helix 7
AA7
A
122 132Right-handed alpha
Helix 8
AA8
A
179 193Right-handed alpha
Helix 9
AA9
A
201 207Right-handed alpha
Helix 10
AB1
A
210 220Right-handed alpha
Helix 11
AB2
A
221 230Right-handed alpha
Helix 12
AB3
A
248 269Right-handed alpha
Helix 13
AB4
A
275 284Right-handed alpha
Helix 14
AB5
A
288 292Right-handed 310
Helix 15
AB6
A
293 299Right-handed alpha
Helix 16
AB7
A
304 319Right-handed alpha
Helix 17
AB8
A
355 375Right-handed alpha
Helix 18
AB9
A
379 400Right-handed alpha
Helix 19
AC1
A
407 410Right-handed 310
Helix 20
AC2
A
414 428Right-handed alpha
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There are 3 sheets in PDB entry 6C4T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
27 31parallel
Strand 3
A
3 7parallel
Strand 4
A
86 89parallel
Strand 5
A
113 116parallel
Strand 6
A
139 143parallel
Strand 7
A
169 174anti-parallel
Strand 8
A
195 198parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 68first strand
Strand 2
A
53 57anti-parallel
Strand 3
A
160 166parallel
Strand 4
A
148 152anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 346first strand
Strand 2
A
351 353anti-parallel
Strand 3
A
404 405parallel
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