Analysis of interatomic Contacts of Structural Units in PDB entry:
6C54


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C54 entry

There are 2 chains in PDB entry 6C54 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 39GLU 385
B
 ARG 39ALA 411
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 6C54. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
48 63Right-handed alpha
Helix 2
AA2
A
68 74Right-handed alpha
Helix 3
AA3
A
74 81Right-handed alpha
Helix 4
AA4
A
86 92Right-handed alpha
Helix 5
AA5
A
93 101Right-handed alpha
Helix 6
AA6
A
127 137Right-handed alpha
Helix 7
AA7
A
146 156Right-handed alpha
Helix 8
AA8
A
157 161Right-handed 310
Helix 9
AA9
A
164 182Right-handed alpha
Helix 10
AB1
A
193 207Right-handed alpha
Helix 11
AB2
A
208 219Right-handed alpha
Helix 12
AB3
A
226 239Right-handed alpha
Helix 13
AB4
A
244 254Right-handed alpha
Helix 14
AB5
A
270 272Right-handed 310
Helix 15
AB6
A
273 288Right-handed alpha
Helix 16
AB7
A
293 295Right-handed 310
Helix 17
AB8
A
296 301Right-handed alpha
Helix 18
AB9
A
302 307Right-handed alpha
Helix 19
AC1
A
315 327Right-handed alpha
Helix 20
AC2
A
340 363Right-handed alpha
Helix 21
AC3
A
369 383Right-handed alpha
Helix 22
AC4
B
48 63Right-handed alpha
Helix 23
AC5
B
68 81Right-handed alpha
Helix 24
AC6
B
86 92Right-handed alpha
Helix 25
AC7
B
93 101Right-handed alpha
Helix 26
AC8
B
116 120Right-handed 310
Helix 27
AC9
B
126 137Right-handed alpha
Helix 28
AD1
B
146 156Right-handed alpha
Helix 29
AD2
B
157 161Right-handed 310
Helix 30
AD3
B
164 183Right-handed alpha
Helix 31
AD4
B
193 207Right-handed alpha
Helix 32
AD5
B
207 220Right-handed alpha
Helix 33
AD6
B
226 239Right-handed alpha
Helix 34
AD7
B
244 254Right-handed alpha
Helix 35
AD8
B
273 288Right-handed alpha
Helix 36
AD9
B
289 294Right-handed 310
Helix 37
AE1
B
303 308Right-handed alpha
Helix 38
AE2
B
315 327Right-handed alpha
Helix 39
AE3
B
340 366Right-handed alpha
Helix 40
AE4
B
369 384Right-handed alpha
Helix 41
AE5
B
392 411Right-handed alpha
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There are 3 sheets in PDB entry 6C54. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 45first strand
Strand 2
A
105 110parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 45first strand
Strand 2
B
108 110parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
255 258first strand
Strand 2
B
261 264anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il