Analysis of interatomic Contacts of Structural Units in PDB entry:
6C56


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C56 entry

There are 2 chains in PDB entry 6C56 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR -3PHE 295
B
 SER 0PHE 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 6C56. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-1 13Right-handed alpha
Helix 2
AA2
A
13 21Right-handed alpha
Helix 3
AA3
A
24 40Right-handed alpha
Helix 4
AA4
A
42 68Right-handed alpha
Helix 5
AA5
A
78 84Right-handed alpha
Helix 6
AA6
A
84 106Right-handed alpha
Helix 7
AA7
A
109 135Right-handed alpha
Helix 8
AA8
A
140 151Right-handed alpha
Helix 9
AA9
A
153 165Right-handed alpha
Helix 10
AB1
A
173 195Right-handed alpha
Helix 11
AB2
A
204 210Right-handed alpha
Helix 12
AB3
A
214 222Right-handed alpha
Helix 13
AB4
A
238 243Right-handed alpha
Helix 14
AB5
A
249 254Right-handed alpha
Helix 15
AB6
A
255 278Right-handed alpha
Helix 16
AB7
A
281 293Right-handed alpha
Helix 17
AB8
B
1 12Right-handed alpha
Helix 18
AB9
B
13 21Right-handed alpha
Helix 19
AC1
B
29 40Right-handed alpha
Helix 20
AC2
B
42 68Right-handed alpha
Helix 21
AC3
B
79 106Right-handed alpha
Helix 22
AC4
B
109 135Right-handed alpha
Helix 23
AC5
B
140 166Right-handed alpha
Helix 24
AC6
B
173 195Right-handed alpha
Helix 25
AC7
B
204 209Right-handed alpha
Helix 26
AC8
B
214 222Right-handed alpha
Helix 27
AC9
B
247 254Right-handed alpha
Helix 28
AD1
B
255 278Right-handed alpha
Helix 29
AD2
B
281 293Right-handed alpha
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There are 2 sheets in PDB entry 6C56. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 73first strand
Strand 2
A
76 77anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 73first strand
Strand 2
B
76 77anti-parallel
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