Analysis of interatomic Contacts of Structural Units in PDB entry:
6C57


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C57 entry

There are 2 chains in PDB entry 6C57 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR -3MET 294
B
 PHE -2MET 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6C57. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-2 21Right-handed alpha
Helix 2
AA2
A
25 40Right-handed alpha
Helix 3
AA3
A
42 69Right-handed alpha
Helix 4
AA4
A
78 84Right-handed alpha
Helix 5
AA5
A
84 106Right-handed alpha
Helix 6
AA6
A
108 135Right-handed alpha
Helix 7
AA7
A
140 151Right-handed alpha
Helix 8
AA8
A
154 166Right-handed alpha
Helix 9
AA9
A
173 195Right-handed alpha
Helix 10
AB1
A
204 209Right-handed alpha
Helix 11
AB2
A
214 222Right-handed alpha
Helix 12
AB3
A
246 255Right-handed alpha
Helix 13
AB4
A
255 277Right-handed alpha
Helix 14
AB5
A
281 292Right-handed alpha
Helix 15
AB6
B
-1 13Right-handed alpha
Helix 16
AB7
B
13 21Right-handed alpha
Helix 17
AB8
B
27 40Right-handed alpha
Helix 18
AB9
B
42 69Right-handed alpha
Helix 19
AC1
B
78 84Right-handed alpha
Helix 20
AC2
B
84 106Right-handed alpha
Helix 21
AC3
B
108 135Right-handed alpha
Helix 22
AC4
B
140 152Right-handed alpha
Helix 23
AC5
B
152 166Right-handed alpha
Helix 24
AC6
B
173 194Right-handed alpha
Helix 25
AC7
B
214 222Right-handed alpha
Helix 26
AC8
B
255 277Right-handed alpha
Helix 27
AC9
B
281 292Right-handed alpha
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There are 2 sheets in PDB entry 6C57. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 73first strand
Strand 2
A
76 77anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 73first strand
Strand 2
B
76 77anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il