Analysis of interatomic Contacts of Structural Units in PDB entry:
6C5X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C5X entry

There are 8 chains in PDB entry 6C5X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 1PRO 100
C
 MET 17CYS 112
E
 MET 1LYS 104
F
 MET 17ASP 111
D
 THR 70GLN 210
A
 ARG 59ILE 211
G
 GLU 756GLU 756
G
 SER 758VAL 760
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6C5X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
23 36Right-handed alpha
Helix 2
AA2
B
38 40Right-handed 310
Helix 3
AA3
C
33 37Right-handed alpha
Helix 4
AA4
C
39 45Right-handed alpha
Helix 5
AA5
C
66 84Right-handed alpha
Helix 6
AA6
C
96 111Right-handed alpha
Helix 7
AA7
E
23 36Right-handed alpha
Helix 8
AA8
E
38 40Right-handed 310
Helix 9
AA9
F
33 37Right-handed alpha
Helix 10
AB1
F
39 45Right-handed alpha
Helix 11
AB2
F
66 84Right-handed alpha
Helix 12
AB3
F
96 111Right-handed alpha
Helix 13
AB4
D
71 77Right-handed alpha
Helix 14
AB5
D
85 94Right-handed alpha
Helix 15
AB6
D
146 157Right-handed alpha
Helix 16
AB7
D
173 186Right-handed alpha
Helix 17
AB8
D
197 207Right-handed alpha
Helix 18
AB9
A
62 77Right-handed alpha
Helix 19
AC1
A
85 95Right-handed alpha
Helix 20
AC2
A
146 157Right-handed alpha
Helix 21
AC3
A
173 186Right-handed alpha
Helix 22
AC4
A
189 193Right-handed 310
Helix 23
AC5
A
197 207Right-handed alpha
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There are 7 sheets in PDB entry 6C5X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 50first strand
Strand 2
B
42 46anti-parallel
Strand 3
B
73 81anti-parallel
Strand 4
B
84 85anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 50first strand
Strand 2
B
42 46anti-parallel
Strand 3
B
73 81anti-parallel
Strand 4
B
2 9parallel
Strand 5
B
12 19anti-parallel
Strand 6
C
28 32parallel
Strand 7
C
18 22anti-parallel
Strand 8
C
59 61parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
49 50first strand
Strand 2
E
42 46anti-parallel
Strand 3
E
73 81anti-parallel
Strand 4
E
84 85anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
49 50first strand
Strand 2
E
42 46anti-parallel
Strand 3
E
73 81anti-parallel
Strand 4
E
2 9parallel
Strand 5
E
12 19anti-parallel
Strand 6
F
28 32parallel
Strand 7
F
18 22anti-parallel
Strand 8
F
59 61parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
143 144first strand
Strand 2
D
134 137anti-parallel
Strand 3
D
123 131anti-parallel
Strand 4
D
111 118anti-parallel
Strand 5
D
100 105anti-parallel
Strand 6
D
164 165parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 83first strand
Strand 2
A
100 105parallel
Strand 3
A
113 118anti-parallel
Strand 4
A
123 131anti-parallel
Strand 5
A
134 137anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 83first strand
Strand 2
A
100 105parallel
Strand 3
A
164 165parallel
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