Analysis of interatomic Contacts of Structural Units in PDB entry:
6C66

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6C66 entry

There are 15 chains in PDB entry 6C66 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	PRO 14	PHE 944
A	PRO 17	LYS 543
B	THR 2	PHE 368
C	THR 2	PHE 368
D	THR 2	PHE 368
E	THR 2	ALA 367
F	THR 2	ALA 367
H	THR 2	ALA 367
I	TYR 5	GLU 229
J	A 1	G 61
K	SER 3	GLU 229
L	T 16	G 65
M	SER 2	GLU 251
N	C 1	A 50
O	THR 2	ILE 226

There are169 helices in PDB entry 6C66. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	34	52	Right-handed alpha
Helix 2	AA2	G	54	65	Right-handed alpha
Helix 3	AA3	G	68	83	Right-handed alpha
Helix 4	AA4	G	84	88	Right-handed 310
Helix 5	AA5	G	92	96	Right-handed 310
Helix 6	AA6	G	114	127	Right-handed alpha
Helix 7	AA7	G	128	131	Right-handed 310
Helix 8	AA8	G	137	148	Right-handed alpha
Helix 9	AA9	G	163	168	Right-handed alpha
Helix 10	AB1	G	172	190	Right-handed alpha
Helix 11	AB2	G	200	220	Right-handed alpha
Helix 12	AB3	G	236	250	Right-handed alpha
Helix 13	AB4	G	251	259	Right-handed alpha
Helix 14	AB5	G	281	295	Right-handed alpha
Helix 15	AB6	G	310	327	Right-handed alpha
Helix 16	AB7	G	338	348	Right-handed alpha
Helix 17	AB8	G	412	416	Right-handed 310
Helix 18	AB9	G	423	428	Right-handed alpha
Helix 19	AC1	G	429	431	Right-handed 310
Helix 20	AC2	G	435	445	Right-handed alpha
Helix 21	AC3	G	457	474	Right-handed alpha
Helix 22	AC4	G	486	503	Right-handed alpha
Helix 23	AC5	G	535	539	Right-handed alpha
Helix 24	AC6	G	566	575	Right-handed alpha
Helix 25	AC7	G	591	594	Right-handed 310
Helix 26	AC8	G	595	602	Right-handed alpha
Helix 27	AC9	G	602	609	Right-handed alpha
Helix 28	AD1	G	624	637	Right-handed alpha
Helix 29	AD2	G	640	647	Right-handed alpha
Helix 30	AD3	G	659	664	Right-handed 310
Helix 31	AD4	G	679	687	Right-handed alpha
Helix 32	AD5	G	688	690	Right-handed 310
Helix 33	AD6	G	736	749	Right-handed alpha
Helix 34	AD7	G	761	771	Right-handed alpha
Helix 35	AD8	G	772	775	Right-handed 310
Helix 36	AD9	G	777	797	Right-handed alpha
Helix 37	AE1	G	810	814	Right-handed 310
Helix 38	AE2	G	863	867	Right-handed 310
Helix 39	AE3	G	869	878	Right-handed alpha
Helix 40	AE4	G	886	891	Right-handed alpha
Helix 41	AE5	G	899	904	Right-handed alpha
Helix 42	AE6	G	905	910	Right-handed alpha
Helix 43	AE7	A	43	50	Right-handed alpha
Helix 44	AE8	A	61	80	Right-handed alpha
Helix 45	AE9	A	89	105	Right-handed alpha
Helix 46	AF1	A	108	117	Right-handed alpha
Helix 47	AF2	A	135	140	Right-handed 310
Helix 48	AF3	A	146	152	Right-handed alpha
Helix 49	AF4	A	178	189	Right-handed alpha
Helix 50	AF5	A	227	235	Right-handed alpha
Helix 51	AF6	A	266	270	Right-handed 310
Helix 52	AF7	A	319	321	Right-handed 310
Helix 53	AF8	A	329	333	Right-handed 310
Helix 54	AF9	A	338	344	Right-handed 310
Helix 55	AG1	A	354	358	Right-handed 310
Helix 56	AG2	A	368	372	Right-handed 310
Helix 57	AG3	A	397	406	Right-handed alpha
Helix 58	AG4	A	408	446	Right-handed alpha
Helix 59	AG5	A	464	486	Right-handed alpha
Helix 60	AG6	A	503	516	Right-handed alpha
Helix 61	AG7	A	517	520	Right-handed 310
Helix 62	AG8	A	522	534	Right-handed alpha
Helix 63	AG9	B	41	52	Right-handed alpha
Helix 64	AH1	B	54	58	Right-handed 310
Helix 65	AH2	B	82	86	Right-handed 310
Helix 66	AH3	B	121	130	Right-handed alpha
Helix 67	AH4	B	159	163	Right-handed 310
Helix 68	AH5	B	164	168	Right-handed 310
Helix 69	AH6	B	239	244	Right-handed alpha
Helix 70	AH7	B	248	266	Right-handed alpha
Helix 71	AH8	B	296	301	Right-handed 310
Helix 72	AH9	B	310	329	Right-handed alpha
Helix 73	AI1	B	355	367	Right-handed alpha
Helix 74	AI2	C	39	55	Right-handed alpha
Helix 75	AI3	C	64	76	Right-handed alpha
Helix 76	AI4	C	79	93	Right-handed alpha
Helix 77	AI5	C	120	133	Right-handed alpha
Helix 78	AI6	C	134	144	Right-handed alpha
Helix 79	AI7	C	152	161	Right-handed alpha
Helix 80	AI8	C	164	171	Right-handed alpha
Helix 81	AI9	C	239	247	Right-handed alpha
Helix 82	AJ1	C	249	266	Right-handed alpha
Helix 83	AJ2	C	296	301	Right-handed 310
Helix 84	AJ3	C	310	327	Right-handed alpha
Helix 85	AJ4	C	355	367	Right-handed alpha
Helix 86	AJ5	D	39	55	Right-handed alpha
Helix 87	AJ6	D	64	76	Right-handed alpha
Helix 88	AJ7	D	79	93	Right-handed alpha
Helix 89	AJ8	D	120	133	Right-handed alpha
Helix 90	AJ9	D	134	143	Right-handed alpha
Helix 91	AK1	D	152	160	Right-handed alpha
Helix 92	AK2	D	164	171	Right-handed alpha
Helix 93	AK3	D	239	247	Right-handed alpha
Helix 94	AK4	D	249	266	Right-handed alpha
Helix 95	AK5	D	296	301	Right-handed 310
Helix 96	AK6	D	310	329	Right-handed alpha
Helix 97	AK7	D	355	368	Right-handed alpha
Helix 98	AK8	E	39	55	Right-handed alpha
Helix 99	AK9	E	64	76	Right-handed alpha
Helix 100	AL1	E	79	93	Right-handed alpha
Helix 101	AL2	E	120	133	Right-handed alpha
Helix 102	AL3	E	134	143	Right-handed alpha
Helix 103	AL4	E	152	161	Right-handed alpha
Helix 104	AL5	E	164	171	Right-handed alpha
Helix 105	AL6	E	239	247	Right-handed alpha
Helix 106	AL7	E	249	266	Right-handed alpha
Helix 107	AL8	E	296	301	Right-handed 310
Helix 108	AL9	E	310	329	Right-handed alpha
Helix 109	AM1	E	355	367	Right-handed alpha
Helix 110	AM2	F	39	55	Right-handed alpha
Helix 111	AM3	F	64	76	Right-handed alpha
Helix 112	AM4	F	79	93	Right-handed alpha
Helix 113	AM5	F	120	133	Right-handed alpha
Helix 114	AM6	F	134	143	Right-handed alpha
Helix 115	AM7	F	152	161	Right-handed alpha
Helix 116	AM8	F	164	171	Right-handed alpha
Helix 117	AM9	F	239	247	Right-handed alpha
Helix 118	AN1	F	249	266	Right-handed alpha
Helix 119	AN2	F	296	301	Right-handed 310
Helix 120	AN3	F	310	329	Right-handed alpha
Helix 121	AN4	F	355	367	Right-handed alpha
Helix 122	AN5	H	39	55	Right-handed alpha
Helix 123	AN6	H	64	76	Right-handed alpha
Helix 124	AN7	H	79	93	Right-handed alpha
Helix 125	AN8	H	120	133	Right-handed alpha
Helix 126	AN9	H	134	143	Right-handed alpha
Helix 127	AO1	H	152	161	Right-handed alpha
Helix 128	AO2	H	164	171	Right-handed alpha
Helix 129	AO3	H	239	247	Right-handed alpha
Helix 130	AO4	H	249	266	Right-handed alpha
Helix 131	AO5	H	296	301	Right-handed 310
Helix 132	AO6	H	310	329	Right-handed alpha
Helix 133	AO7	H	355	367	Right-handed alpha
Helix 134	AO8	I	6	24	Right-handed alpha
Helix 135	AO9	I	24	33	Right-handed alpha
Helix 136	AP1	I	41	45	Right-handed 310
Helix 137	AP2	I	47	52	Right-handed alpha
Helix 138	AP3	I	53	55	Right-handed 310
Helix 139	AP4	I	75	90	Right-handed alpha
Helix 140	AP5	I	92	100	Right-handed alpha
Helix 141	AP6	I	138	151	Right-handed alpha
Helix 142	AP7	I	153	166	Right-handed alpha
Helix 143	AP8	I	168	186	Right-handed alpha
Helix 144	AP9	I	191	201	Right-handed alpha
Helix 145	AQ1	I	202	204	Right-handed 310
Helix 146	AQ2	I	209	227	Right-handed alpha
Helix 147	AQ3	K	4	24	Right-handed alpha
Helix 148	AQ4	K	24	33	Right-handed alpha
Helix 149	AQ5	K	45	51	Right-handed alpha
Helix 150	AQ6	K	52	55	Right-handed 310
Helix 151	AQ7	K	75	90	Right-handed alpha
Helix 152	AQ8	K	92	97	Right-handed alpha
Helix 153	AQ9	K	138	150	Right-handed alpha
Helix 154	AR1	K	153	166	Right-handed alpha
Helix 155	AR2	K	168	185	Right-handed alpha
Helix 156	AR3	K	191	205	Right-handed alpha
Helix 157	AR4	K	205	228	Right-handed alpha
Helix 158	AR5	M	31	44	Right-handed alpha
Helix 159	AR6	M	51	55	Right-handed 310
Helix 160	AR7	M	95	99	Right-handed 310
Helix 161	AR8	M	121	130	Right-handed alpha
Helix 162	AR9	M	157	164	Right-handed alpha
Helix 163	AS1	M	227	231	Right-handed 310
Helix 164	AS2	M	236	248	Right-handed alpha
Helix 165	AS3	O	22	33	Right-handed alpha
Helix 166	AS4	O	92	97	Right-handed 310
Helix 167	AS5	O	144	153	Right-handed alpha
Helix 168	AS6	O	198	209	Right-handed alpha
Helix 169	AS7	O	213	217	Right-handed 310

There are 37 sheets in PDB entry 6C66. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	21	23	first strand
Strand 2	G	32	33	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	421	422	first strand
Strand 2	G	331	335	parallel
Strand 3	G	447	451	parallel
Strand 4	G	478	482	parallel
Strand 5	G	299	304	parallel
Strand 6	G	523	526	anti-parallel
Strand 7	G	532	534	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	617	618	first strand
Strand 2	G	656	658	parallel
Strand 3	G	586	588	parallel
Strand 4	G	673	676	parallel
Strand 5	G	709	714	parallel
Strand 6	G	551	557	parallel
Strand 7	G	754	755	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	560	561	first strand
Strand 2	G	564	565	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	833	836	first strand
Strand 2	G	881	884	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	840	841	first strand
Strand 2	G	916	918	parallel
Strand 3	G	924	925	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	927	928	first strand
Strand 2	G	933	937	anti-parallel
Strand 3	G	941	943	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	42	first strand
Strand 2	A	28	32	anti-parallel
Strand 3	A	54	58	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	176	177	first strand
Strand 2	A	290	298	anti-parallel
Strand 3	A	278	284	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	201	202	first strand
Strand 2	A	205	206	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	219	224	first strand
Strand 2	A	373	381	anti-parallel
Strand 3	A	387	394	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	315	317	first strand
Strand 2	A	323	325	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	188	first strand
Strand 2	B	220	238	anti-parallel
Strand 3	B	200	206	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	188	first strand
Strand 2	B	220	238	anti-parallel
Strand 3	B	3	15	anti-parallel
Strand 4	B	283	289	anti-parallel
Strand 5	B	334	339	anti-parallel
Strand 6	B	351	352	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	30	first strand
Strand 2	B	33	38	anti-parallel
Strand 3	B	191	192	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	188	first strand
Strand 2	C	218	238	anti-parallel
Strand 3	C	200	207	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	188	first strand
Strand 2	C	218	238	anti-parallel
Strand 3	C	3	15	anti-parallel
Strand 4	C	283	289	anti-parallel
Strand 5	C	334	339	anti-parallel
Strand 6	C	351	352	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	33	38	anti-parallel
Strand 3	C	191	192	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	62	first strand
Strand 2	C	117	118	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	27	30	first strand
Strand 2	D	33	38	anti-parallel
Strand 3	D	191	193	anti-parallel
Strand 4	D	220	238	anti-parallel
Strand 5	D	200	206	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	188	first strand
Strand 2	D	220	238	anti-parallel
Strand 3	D	3	15	anti-parallel
Strand 4	D	283	289	anti-parallel
Strand 5	D	334	339	anti-parallel
Strand 6	D	351	352	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	61	62	first strand
Strand 2	D	117	118	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	27	30	first strand
Strand 2	E	33	38	anti-parallel
Strand 3	E	191	193	anti-parallel
Strand 4	E	220	238	anti-parallel
Strand 5	E	200	206	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	186	188	first strand
Strand 2	E	220	238	anti-parallel
Strand 3	E	3	15	anti-parallel
Strand 4	E	283	289	anti-parallel
Strand 5	E	334	339	anti-parallel
Strand 6	E	351	352	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	61	62	first strand
Strand 2	E	117	118	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	27	30	first strand
Strand 2	F	33	38	anti-parallel
Strand 3	F	191	193	anti-parallel
Strand 4	F	220	238	anti-parallel
Strand 5	F	200	206	anti-parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	186	188	first strand
Strand 2	F	220	238	anti-parallel
Strand 3	F	3	15	anti-parallel
Strand 4	F	283	289	anti-parallel
Strand 5	F	334	339	anti-parallel
Strand 6	F	351	352	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	61	62	first strand
Strand 2	F	117	118	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	27	30	first strand
Strand 2	H	33	38	anti-parallel
Strand 3	H	191	193	anti-parallel
Strand 4	H	229	238	anti-parallel
Strand 5	H	186	188	anti-parallel

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There are 8 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	27	30	first strand
Strand 2	H	33	38	anti-parallel
Strand 3	H	191	193	anti-parallel
Strand 4	H	229	238	anti-parallel
Strand 5	H	3	12	anti-parallel
Strand 6	H	283	289	anti-parallel
Strand 7	H	334	339	anti-parallel
Strand 8	H	351	352	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	61	62	first strand
Strand 2	H	117	118	anti-parallel

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There are 7 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	150	152	first strand
Strand 2	M	5	8	anti-parallel
Strand 3	M	112	118	anti-parallel
Strand 4	M	58	65	anti-parallel
Strand 5	M	180	186	anti-parallel
Strand 6	M	213	226	anti-parallel
Strand 7	M	198	206	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	12	13	first strand
Strand 2	M	101	109	anti-parallel
Strand 3	M	68	76	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	52	55	first strand
Strand 2	O	64	68	anti-parallel
Strand 3	O	3	7	anti-parallel
Strand 4	O	85	88	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	188	195	first strand
Strand 2	O	101	108	anti-parallel
Strand 3	O	221	224	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	112	114	first strand
Strand 2	O	122	124	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	170	171	first strand
Strand 2	O	183	184	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6C66

Analysis of interatomic Contacts of Structural Units in PDB entry:
6C66