Analysis of interatomic Contacts of Structural Units in PDB entry:
6C6B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C6B entry

There are 6 chains in PDB entry 6C6B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4ALA 203
B
 ALA 2ALA 203
C
 PHE 7ALA 203
D
 HIS 8ALA 203
E
 HIS 8PRO 202
F
 ILE 5ALA 203
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 6C6B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 22Right-handed alpha
Helix 2
AA2
A
37 52Right-handed alpha
Helix 3
AA3
A
60 65Right-handed alpha
Helix 4
AA4
A
75 96Right-handed alpha
Helix 5
AA5
A
108 121Right-handed alpha
Helix 6
AA6
A
136 144Right-handed alpha
Helix 7
AA7
A
183 198Right-handed alpha
Helix 8
AA8
B
13 22Right-handed alpha
Helix 9
AA9
B
37 52Right-handed alpha
Helix 10
AB1
B
60 65Right-handed alpha
Helix 11
AB2
B
75 96Right-handed alpha
Helix 12
AB3
B
108 121Right-handed alpha
Helix 13
AB4
B
136 144Right-handed alpha
Helix 14
AB5
B
183 198Right-handed alpha
Helix 15
AB6
C
13 22Right-handed alpha
Helix 16
AB7
C
37 52Right-handed alpha
Helix 17
AB8
C
60 65Right-handed alpha
Helix 18
AB9
C
75 96Right-handed alpha
Helix 19
AC1
C
108 121Right-handed alpha
Helix 20
AC2
C
136 144Right-handed alpha
Helix 21
AC3
C
183 198Right-handed alpha
Helix 22
AC4
D
13 22Right-handed alpha
Helix 23
AC5
D
37 52Right-handed alpha
Helix 24
AC6
D
60 65Right-handed alpha
Helix 25
AC7
D
75 96Right-handed alpha
Helix 26
AC8
D
108 121Right-handed alpha
Helix 27
AC9
D
136 144Right-handed alpha
Helix 28
AD1
D
183 198Right-handed alpha
Helix 29
AD2
E
13 22Right-handed alpha
Helix 30
AD3
E
37 52Right-handed alpha
Helix 31
AD4
E
60 65Right-handed alpha
Helix 32
AD5
E
75 96Right-handed alpha
Helix 33
AD6
E
108 121Right-handed alpha
Helix 34
AD7
E
136 144Right-handed alpha
Helix 35
AD8
E
183 198Right-handed alpha
Helix 36
AD9
F
13 22Right-handed alpha
Helix 37
AE1
F
37 52Right-handed alpha
Helix 38
AE2
F
60 65Right-handed alpha
Helix 39
AE3
F
75 96Right-handed alpha
Helix 40
AE4
F
108 121Right-handed alpha
Helix 41
AE5
F
136 144Right-handed alpha
Helix 42
AE6
F
183 198Right-handed alpha
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There are 6 sheets in PDB entry 6C6B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
99 103parallel
Strand 3
A
26 31parallel
Strand 4
A
128 134parallel
Strand 5
A
175 178parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 59first strand
Strand 2
B
99 103parallel
Strand 3
B
26 31parallel
Strand 4
B
128 134parallel
Strand 5
B
175 178parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 59first strand
Strand 2
C
99 103parallel
Strand 3
C
26 31parallel
Strand 4
C
128 134parallel
Strand 5
C
175 178parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
56 59first strand
Strand 2
D
99 103parallel
Strand 3
D
26 31parallel
Strand 4
D
128 134parallel
Strand 5
D
175 178parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
56 59first strand
Strand 2
E
99 103parallel
Strand 3
E
26 32parallel
Strand 4
E
128 134parallel
Strand 5
E
175 178parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
56 59first strand
Strand 2
F
99 103parallel
Strand 3
F
26 31parallel
Strand 4
F
128 134parallel
Strand 5
F
175 178parallel
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