Analysis of interatomic Contacts of Structural Units in PDB entry:
6C6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C6L entry

There are 15 chains in PDB entry 6C6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 SER 7SER 163
C
 LYS 14GLN 213
N
 ASP 212LYS 263
M
 MET 1PRO 69
E
 MET 1VAL 159
B
 GLU 2TYR 345
F
 MET 1VAL 159
G
 MET 1VAL 159
H
 MET 1CYS 160
I
 MET 1VAL 159
J
 MET 1VAL 159
K
 MET 1CYS 160
L
 MET 1VAL 159
A
 GLU 3GLU 828
O
 ARG 2ARG 77
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are103 helices in PDB entry 6C6L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
14 49Right-handed alpha
Helix 2
AA2
D
55 60Right-handed alpha
Helix 3
AA3
D
60 81Right-handed alpha
Helix 4
AA4
D
91 124Right-handed alpha
Helix 5
AA5
D
125 129Right-handed 310
Helix 6
AA6
D
133 160Right-handed alpha
Helix 7
AA7
C
16 39Right-handed alpha
Helix 8
AA8
C
46 54Right-handed alpha
Helix 9
AA9
C
55 90Right-handed alpha
Helix 10
AB1
C
95 100Right-handed alpha
Helix 11
AB2
C
101 123Right-handed alpha
Helix 12
AB3
C
135 173Right-handed alpha
Helix 13
AB4
C
180 185Right-handed alpha
Helix 14
AB5
C
185 192Right-handed alpha
Helix 15
AB6
C
192 208Right-handed alpha
Helix 16
AB7
N
223 245Right-handed alpha
Helix 17
AB8
N
250 254Right-handed 310
Helix 18
AB9
M
4 24Right-handed alpha
Helix 19
AC1
M
29 51Right-handed alpha
Helix 20
AC2
E
9 43Right-handed alpha
Helix 21
AC3
E
49 54Right-handed alpha
Helix 22
AC4
E
54 76Right-handed alpha
Helix 23
AC5
E
83 122Right-handed alpha
Helix 24
AC6
E
125 153Right-handed alpha
Helix 25
AC7
B
4 9Right-handed 310
Helix 26
AC8
B
10 22Right-handed alpha
Helix 27
AC9
B
26 35Right-handed alpha
Helix 28
AD1
B
38 47Right-handed alpha
Helix 29
AD2
B
64 86Right-handed alpha
Helix 30
AD3
B
88 116Right-handed alpha
Helix 31
AD4
B
119 127Right-handed alpha
Helix 32
AD5
B
144 156Right-handed alpha
Helix 33
AD6
B
173 199Right-handed alpha
Helix 34
AD7
B
202 231Right-handed alpha
Helix 35
AD8
B
234 242Right-handed alpha
Helix 36
AD9
B
243 247Right-handed 310
Helix 37
AE1
B
251 258Right-handed alpha
Helix 38
AE2
B
261 269Right-handed alpha
Helix 39
AE3
B
283 300Right-handed alpha
Helix 40
AE4
B
307 332Right-handed alpha
Helix 41
AE5
B
335 341Right-handed 310
Helix 42
AE6
F
8 43Right-handed alpha
Helix 43
AE7
F
54 76Right-handed alpha
Helix 44
AE8
F
84 122Right-handed alpha
Helix 45
AE9
F
124 153Right-handed alpha
Helix 46
AF1
G
9 43Right-handed alpha
Helix 47
AF2
G
47 51Right-handed 310
Helix 48
AF3
G
56 76Right-handed alpha
Helix 49
AF4
G
83 122Right-handed alpha
Helix 50
AF5
G
125 153Right-handed alpha
Helix 51
AF6
H
9 43Right-handed alpha
Helix 52
AF7
H
46 50Right-handed 310
Helix 53
AF8
H
54 76Right-handed alpha
Helix 54
AF9
H
83 122Right-handed alpha
Helix 55
AG1
H
124 155Right-handed alpha
Helix 56
AG2
I
9 43Right-handed alpha
Helix 57
AG3
I
44 45Right-handed 310
Helix 58
AG4
I
46 50Right-handed 310
Helix 59
AG5
I
54 76Right-handed alpha
Helix 60
AG6
I
83 122Right-handed alpha
Helix 61
AG7
I
124 153Right-handed alpha
Helix 62
AG8
J
8 43Right-handed alpha
Helix 63
AG9
J
49 54Right-handed alpha
Helix 64
AH1
J
54 76Right-handed alpha
Helix 65
AH2
J
83 122Right-handed alpha
Helix 66
AH3
J
124 155Right-handed alpha
Helix 67
AH4
K
9 43Right-handed alpha
Helix 68
AH5
K
46 50Right-handed 310
Helix 69
AH6
K
54 76Right-handed alpha
Helix 70
AH7
K
83 122Right-handed alpha
Helix 71
AH8
K
124 155Right-handed alpha
Helix 72
AH9
L
8 43Right-handed alpha
Helix 73
AI1
L
54 77Right-handed alpha
Helix 74
AI2
L
83 122Right-handed alpha
Helix 75
AI3
L
124 134Right-handed alpha
Helix 76
AI4
L
134 152Right-handed alpha
Helix 77
AI5
A
25 36Right-handed alpha
Helix 78
AI6
A
55 79Right-handed alpha
Helix 79
AI7
A
87 93Right-handed alpha
Helix 80
AI8
A
106 145Right-handed alpha
Helix 81
AI9
A
195 208Right-handed alpha
Helix 82
AJ1
A
242 256Right-handed alpha
Helix 83
AJ2
A
267 303Right-handed alpha
Helix 84
AJ3
A
305 325Right-handed alpha
Helix 85
AJ4
A
343 359Right-handed alpha
Helix 86
AJ5
A
387 395Right-handed alpha
Helix 87
AJ6
A
407 423Right-handed alpha
Helix 88
AJ7
A
425 442Right-handed alpha
Helix 89
AJ8
A
442 447Right-handed alpha
Helix 90
AJ9
A
454 461Right-handed alpha
Helix 91
AK1
A
461 480Right-handed alpha
Helix 92
AK2
A
519 523Right-handed 310
Helix 93
AK3
A
526 554Right-handed alpha
Helix 94
AK4
A
554 560Right-handed alpha
Helix 95
AK5
A
568 596Right-handed alpha
Helix 96
AK6
A
609 618Right-handed alpha
Helix 97
AK7
A
629 652Right-handed alpha
Helix 98
AK8
A
709 732Right-handed alpha
Helix 99
AK9
A
733 759Right-handed alpha
Helix 100
AL1
A
764 804Right-handed alpha
Helix 101
AL2
A
805 810Right-handed alpha
Helix 102
AL3
O
9 31Right-handed alpha
Helix 103
AL4
O
51 75Right-handed alpha
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There are 4 sheets in PDB entry 6C6L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 42first strand
Strand 2
A
334 342anti-parallel
Strand 3
A
327 329anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 42first strand
Strand 2
A
334 342anti-parallel
Strand 3
A
14 22anti-parallel
Strand 4
A
369 370anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 217first strand
Strand 2
A
233 239anti-parallel
Strand 3
A
186 192anti-parallel
Strand 4
A
258 261anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 379first strand
Strand 2
A
815 816parallel
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