Analysis of interatomic Contacts of Structural Units in PDB entry:
6C6M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C6M entry

There are 3 chains in PDB entry 6C6M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 413LEU 507
B
 PHE 413ARG 506
C
 PHE 413LEU 507
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 6C6M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
478 482Right-handed 310
Helix 2
AA2
B
478 482Right-handed 310
Helix 3
AA3
C
478 482Right-handed 310
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There are 6 sheets in PDB entry 6C6M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 418first strand
Strand 2
A
431 438anti-parallel
Strand 3
A
469 474anti-parallel
Strand 4
A
461 466anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 425first strand
Strand 2
A
494 504parallel
Strand 3
A
483 491anti-parallel
Strand 4
A
444 449anti-parallel
Strand 5
A
452 453anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
415 418first strand
Strand 2
B
431 438anti-parallel
Strand 3
B
469 474anti-parallel
Strand 4
B
461 466anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
423 426first strand
Strand 2
B
495 505parallel
Strand 3
B
483 490anti-parallel
Strand 4
B
444 449anti-parallel
Strand 5
B
452 454anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
415 418first strand
Strand 2
C
431 438anti-parallel
Strand 3
C
470 474anti-parallel
Strand 4
C
461 465anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
423 426first strand
Strand 2
C
495 505parallel
Strand 3
C
483 490anti-parallel
Strand 4
C
444 449anti-parallel
Strand 5
C
452 453anti-parallel
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