Analysis of interatomic Contacts of Structural Units in PDB entry:
6C6N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C6N entry

There are 2 chains in PDB entry 6C6N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 122TYR 571
B
 ASN 122TYR 571
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6C6N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
132 145Right-handed alpha
Helix 2
AA2
A
168 178Right-handed alpha
Helix 3
AA3
A
180 185Right-handed 310
Helix 4
AA4
A
225 239Right-handed alpha
Helix 5
AA5
A
291 296Right-handed alpha
Helix 6
AA6
A
355 363Right-handed alpha
Helix 7
AA7
A
364 368Right-handed 310
Helix 8
AA8
A
369 371Right-handed 310
Helix 9
AA9
A
372 383Right-handed alpha
Helix 10
AB1
A
407 410Right-handed 310
Helix 11
AB2
A
414 418Right-handed 310
Helix 12
AB3
A
419 437Right-handed alpha
Helix 13
AB4
A
443 460Right-handed alpha
Helix 14
AB5
A
461 478Right-handed alpha
Helix 15
AB6
A
481 497Right-handed alpha
Helix 16
AB7
A
499 510Right-handed alpha
Helix 17
AB8
A
515 538Right-handed alpha
Helix 18
AB9
A
539 543Right-handed 310
Helix 19
AC1
A
544 567Right-handed alpha
Helix 20
AC2
B
132 145Right-handed alpha
Helix 21
AC3
B
168 178Right-handed alpha
Helix 22
AC4
B
180 185Right-handed 310
Helix 23
AC5
B
225 239Right-handed alpha
Helix 24
AC6
B
291 296Right-handed alpha
Helix 25
AC7
B
355 363Right-handed alpha
Helix 26
AC8
B
364 368Right-handed 310
Helix 27
AC9
B
369 371Right-handed 310
Helix 28
AD1
B
372 382Right-handed alpha
Helix 29
AD2
B
407 410Right-handed 310
Helix 30
AD3
B
414 418Right-handed 310
Helix 31
AD4
B
419 437Right-handed alpha
Helix 32
AD5
B
443 460Right-handed alpha
Helix 33
AD6
B
461 478Right-handed alpha
Helix 34
AD7
B
481 497Right-handed alpha
Helix 35
AD8
B
499 510Right-handed alpha
Helix 36
AD9
B
515 538Right-handed alpha
Helix 37
AE1
B
539 542Right-handed 310
Helix 38
AE2
B
543 567Right-handed alpha
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There are 6 sheets in PDB entry 6C6N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 277first strand
Strand 2
A
260 267anti-parallel
Strand 3
A
243 255anti-parallel
Strand 4
A
149 153parallel
Strand 5
A
126 129parallel
Strand 6
A
280 283parallel
Strand 7
A
403 405parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 167first strand
Strand 2
A
221 223anti-parallel
Strand 3
A
190 192anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 209first strand
Strand 2
A
194 199anti-parallel
Strand 3
A
321 326parallel
Strand 4
A
332 336anti-parallel
Strand 5
A
341 348anti-parallel
Strand 6
A
301 312anti-parallel
Strand 7
A
386 392anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
273 277first strand
Strand 2
B
260 267anti-parallel
Strand 3
B
243 255anti-parallel
Strand 4
B
149 153parallel
Strand 5
B
126 129parallel
Strand 6
B
280 283parallel
Strand 7
B
403 405parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 167first strand
Strand 2
B
221 223anti-parallel
Strand 3
B
190 192anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
204 209first strand
Strand 2
B
194 199anti-parallel
Strand 3
B
321 326parallel
Strand 4
B
332 336anti-parallel
Strand 5
B
341 348anti-parallel
Strand 6
B
301 312anti-parallel
Strand 7
B
386 392anti-parallel
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