Analysis of interatomic Contacts of Structural Units in PDB entry:
6C72

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6C72 entry

There are 3 chains in PDB entry 6C72 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 204	LEU 782
B	SER 204	LEU 782
C	SER 204	SER 345

There are 21 helices in PDB entry 6C72. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	209	214	Right-handed alpha
Helix 2	AA2	A	279	282	Right-handed 310
Helix 3	AA3	A	295	309	Right-handed alpha
Helix 4	AA4	A	345	352	Right-handed alpha
Helix 5	AA5	A	623	628	Right-handed alpha
Helix 6	AA6	A	648	655	Right-handed 310
Helix 7	AA7	A	773	777	Right-handed 310
Helix 8	AA8	B	209	214	Right-handed alpha
Helix 9	AA9	B	279	282	Right-handed 310
Helix 10	AB1	B	295	309	Right-handed alpha
Helix 11	AB2	B	345	352	Right-handed alpha
Helix 12	AB3	B	623	628	Right-handed alpha
Helix 13	AB4	B	651	655	Right-handed 310
Helix 14	AB5	B	773	777	Right-handed 310
Helix 15	AB6	C	209	214	Right-handed alpha
Helix 16	AB7	C	279	282	Right-handed 310
Helix 17	AB8	C	295	309	Right-handed alpha
Helix 18	AB9	C	345	352	Right-handed alpha
Helix 19	AC1	C	623	628	Right-handed alpha
Helix 20	AC2	C	651	655	Right-handed 310
Helix 21	AC3	C	773	777	Right-handed 310

There are 25 sheets in PDB entry 6C72. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	205	207	first strand
Strand 2	A	224	227	parallel
Strand 3	A	240	244	anti-parallel
Strand 4	A	266	269	anti-parallel
Strand 5	A	256	258	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	277	first strand
Strand 2	A	312	315	parallel
Strand 3	A	331	334	parallel
Strand 4	A	386	393	parallel
Strand 5	A	365	368	parallel
Strand 6	A	319	322	parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	277	first strand
Strand 2	A	312	315	parallel
Strand 3	A	331	334	parallel
Strand 4	A	386	393	parallel
Strand 5	A	416	423	parallel
Strand 6	A	441	446	parallel
Strand 7	A	458	469	parallel
Strand 8	A	486	488	parallel
Strand 9	A	519	522	parallel
Strand 10	A	546	549	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	326	first strand
Strand 2	A	374	378	parallel
Strand 3	A	406	410	parallel
Strand 4	A	428	433	parallel
Strand 5	A	458	469	parallel
Strand 6	A	486	488	parallel
Strand 7	A	519	522	parallel
Strand 8	A	546	549	parallel

Back to list of sheets
Back to top of page

There are 17 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	634	636	first strand
Strand 2	A	613	615	parallel
Strand 3	A	588	589	parallel
Strand 4	A	564	565	parallel
Strand 5	A	540	543	parallel
Strand 6	A	507	510	parallel
Strand 7	A	472	475	parallel
Strand 8	A	449	450	parallel
Strand 9	A	416	423	parallel
Strand 10	A	441	446	parallel
Strand 11	A	458	469	parallel
Strand 12	A	498	504	parallel
Strand 13	A	534	537	parallel
Strand 14	A	558	561	parallel
Strand 15	A	578	585	parallel
Strand 16	A	602	610	parallel
Strand 17	A	629	630	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	570	571	first strand
Strand 2	A	598	599	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	661	664	first strand
Strand 2	A	671	680	anti-parallel
Strand 3	A	762	771	anti-parallel
Strand 4	A	695	703	anti-parallel
Strand 5	A	714	722	anti-parallel
Strand 6	A	727	736	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	742	747	first strand
Strand 2	A	750	755	anti-parallel
Strand 3	A	686	690	anti-parallel
Strand 4	A	780	781	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	205	207	first strand
Strand 2	B	224	227	parallel
Strand 3	B	240	244	anti-parallel
Strand 4	B	266	269	anti-parallel
Strand 5	B	256	258	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	275	277	first strand
Strand 2	B	312	315	parallel
Strand 3	B	331	334	parallel
Strand 4	B	386	393	parallel
Strand 5	B	365	368	parallel
Strand 6	B	319	322	parallel

Back to list of sheets
Back to top of page

There are 10 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	275	277	first strand
Strand 2	B	312	315	parallel
Strand 3	B	331	334	parallel
Strand 4	B	386	393	parallel
Strand 5	B	416	423	parallel
Strand 6	B	441	446	parallel
Strand 7	B	456	469	parallel
Strand 8	B	486	488	parallel
Strand 9	B	519	522	parallel
Strand 10	B	546	549	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	325	326	first strand
Strand 2	B	374	378	parallel
Strand 3	B	406	410	parallel
Strand 4	B	428	433	parallel
Strand 5	B	456	469	parallel
Strand 6	B	486	488	parallel
Strand 7	B	519	522	parallel
Strand 8	B	546	549	parallel

Back to list of sheets
Back to top of page

There are 17 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	634	636	first strand
Strand 2	B	613	615	parallel
Strand 3	B	588	589	parallel
Strand 4	B	564	565	parallel
Strand 5	B	540	543	parallel
Strand 6	B	507	510	parallel
Strand 7	B	472	475	parallel
Strand 8	B	449	450	parallel
Strand 9	B	416	423	parallel
Strand 10	B	441	446	parallel
Strand 11	B	456	469	parallel
Strand 12	B	498	504	parallel
Strand 13	B	534	537	parallel
Strand 14	B	558	561	parallel
Strand 15	B	578	585	parallel
Strand 16	B	602	610	parallel
Strand 17	B	629	630	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	570	571	first strand
Strand 2	B	598	599	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	661	664	first strand
Strand 2	B	671	680	anti-parallel
Strand 3	B	762	771	anti-parallel
Strand 4	B	695	703	anti-parallel
Strand 5	B	714	722	anti-parallel
Strand 6	B	727	736	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	742	747	first strand
Strand 2	B	750	755	anti-parallel
Strand 3	B	686	690	anti-parallel
Strand 4	B	780	781	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	205	207	first strand
Strand 2	C	224	227	parallel
Strand 3	C	240	244	anti-parallel
Strand 4	C	266	270	anti-parallel
Strand 5	C	256	258	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	275	277	first strand
Strand 2	C	312	315	parallel
Strand 3	C	331	334	parallel
Strand 4	C	386	396	parallel
Strand 5	C	365	369	parallel
Strand 6	C	319	322	parallel

Back to list of sheets
Back to top of page

There are 10 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	275	277	first strand
Strand 2	C	312	315	parallel
Strand 3	C	331	334	parallel
Strand 4	C	386	396	parallel
Strand 5	C	416	423	parallel
Strand 6	C	441	446	parallel
Strand 7	C	456	469	parallel
Strand 8	C	486	488	parallel
Strand 9	C	519	522	parallel
Strand 10	C	546	549	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	325	326	first strand
Strand 2	C	374	378	parallel
Strand 3	C	406	410	parallel
Strand 4	C	428	433	parallel
Strand 5	C	456	469	parallel
Strand 6	C	486	488	parallel
Strand 7	C	519	522	parallel
Strand 8	C	546	549	parallel

Back to list of sheets
Back to top of page

There are 17 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	634	636	first strand
Strand 2	C	613	615	parallel
Strand 3	C	588	589	parallel
Strand 4	C	564	565	parallel
Strand 5	C	540	543	parallel
Strand 6	C	507	510	parallel
Strand 7	C	472	475	parallel
Strand 8	C	449	450	parallel
Strand 9	C	416	423	parallel
Strand 10	C	441	446	parallel
Strand 11	C	456	469	parallel
Strand 12	C	498	504	parallel
Strand 13	C	534	537	parallel
Strand 14	C	558	561	parallel
Strand 15	C	582	585	parallel
Strand 16	C	607	610	parallel
Strand 17	C	629	630	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	570	571	first strand
Strand 2	C	598	599	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	578	579	first strand
Strand 2	C	602	603	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	661	664	first strand
Strand 2	C	671	680	anti-parallel
Strand 3	C	762	771	anti-parallel
Strand 4	C	695	703	anti-parallel
Strand 5	C	714	722	anti-parallel
Strand 6	C	727	736	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	742	747	first strand
Strand 2	C	750	755	anti-parallel
Strand 3	C	686	690	anti-parallel
Strand 4	C	780	781	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6C72

Analysis of interatomic Contacts of Structural Units in PDB entry:
6C72