Analysis of interatomic Contacts of Structural Units in PDB entry:
6C7L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C7L entry

There is 1 chain in PDB entry 6C7L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6C7L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 16Right-handed 310
Helix 2
AA2
A
17 23Right-handed alpha
Helix 3
AA3
A
33 39Right-handed alpha
Helix 4
AA4
A
40 52Right-handed alpha
Helix 5
AA5
A
67 82Right-handed alpha
Helix 6
AA6
A
91 107Right-handed alpha
Helix 7
AA7
A
111 116Right-handed alpha
Helix 8
AA8
A
165 168Right-handed 310
Helix 9
AA9
A
178 182Right-handed 310
Helix 10
AB1
A
183 204Right-handed alpha
Helix 11
AB2
A
208 231Right-handed alpha
Helix 12
AB3
A
233 255Right-handed alpha
Helix 13
AB4
A
257 266Right-handed alpha
Helix 14
AB5
A
267 270Right-handed 310
Helix 15
AB6
A
271 291Right-handed alpha
Helix 16
AB7
A
291 305Right-handed alpha
Helix 17
AB8
A
309 324Right-handed alpha
Helix 18
AB9
A
328 332Right-handed 310
Helix 19
AC1
A
334 352Right-handed alpha
Helix 20
AC2
A
353 358Right-handed 310
Helix 21
AC3
A
363 377Right-handed alpha
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There are 2 sheets in PDB entry 6C7L. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 10first strand
Strand 2
A
171 174parallel
Strand 3
A
133 138parallel
Strand 4
A
85 90parallel
Strand 5
A
27 32parallel
Strand 6
A
55 60parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 155first strand
Strand 2
A
158 163anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il