Analysis of interatomic Contacts of Structural Units in PDB entry:
6C7N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C7N entry

There are 3 chains in PDB entry 6C7N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 84GLN 636
B
 GLU 84GLN 636
C
 GLU 84ASP 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are117 helices in PDB entry 6C7N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
96 102Right-handed alpha
Helix 2
AA2
A
108 112Right-handed 310
Helix 3
AA3
A
113 120Right-handed alpha
Helix 4
AA4
A
132 145Right-handed alpha
Helix 5
AA5
A
149 162Right-handed alpha
Helix 6
AA6
A
164 175Right-handed alpha
Helix 7
AA7
A
175 184Right-handed alpha
Helix 8
AA8
A
186 194Right-handed alpha
Helix 9
AA9
A
210 212Right-handed 310
Helix 10
AB1
A
214 220Right-handed alpha
Helix 11
AB2
A
244 248Right-handed 310
Helix 12
AB3
A
249 264Right-handed alpha
Helix 13
AB4
A
266 268Right-handed 310
Helix 14
AB5
A
281 287Right-handed alpha
Helix 15
AB6
A
300 319Right-handed alpha
Helix 16
AB7
A
330 342Right-handed alpha
Helix 17
AB8
A
350 371Right-handed alpha
Helix 18
AB9
A
385 404Right-handed alpha
Helix 19
AC1
A
406 411Right-handed alpha
Helix 20
AC2
A
424 431Right-handed 310
Helix 21
AC3
A
432 439Right-handed 310
Helix 22
AC4
A
447 456Right-handed alpha
Helix 23
AC5
A
471 482Right-handed alpha
Helix 24
AC6
A
493 497Right-handed 310
Helix 25
AC7
A
500 508Right-handed alpha
Helix 26
AC8
A
536 539Right-handed 310
Helix 27
AC9
A
540 552Right-handed alpha
Helix 28
AD1
A
557 571Right-handed alpha
Helix 29
AD2
A
573 578Right-handed alpha
Helix 30
AD3
A
585 587Right-handed 310
Helix 31
AD4
A
588 607Right-handed alpha
Helix 32
AD5
A
618 626Right-handed alpha
Helix 33
AD6
B
96 102Right-handed alpha
Helix 34
AD7
B
108 112Right-handed 310
Helix 35
AD8
B
113 120Right-handed alpha
Helix 36
AD9
B
132 145Right-handed alpha
Helix 37
AE1
B
149 162Right-handed alpha
Helix 38
AE2
B
164 175Right-handed alpha
Helix 39
AE3
B
175 184Right-handed alpha
Helix 40
AE4
B
186 194Right-handed alpha
Helix 41
AE5
B
210 212Right-handed 310
Helix 42
AE6
B
214 221Right-handed alpha
Helix 43
AE7
B
244 248Right-handed 310
Helix 44
AE8
B
249 264Right-handed alpha
Helix 45
AE9
B
266 268Right-handed 310
Helix 46
AF1
B
281 287Right-handed alpha
Helix 47
AF2
B
300 319Right-handed alpha
Helix 48
AF3
B
330 342Right-handed alpha
Helix 49
AF4
B
352 371Right-handed alpha
Helix 50
AF5
B
385 404Right-handed alpha
Helix 51
AF6
B
406 411Right-handed alpha
Helix 52
AF7
B
424 431Right-handed 310
Helix 53
AF8
B
432 439Right-handed 310
Helix 54
AF9
B
447 456Right-handed alpha
Helix 55
AG1
B
471 482Right-handed alpha
Helix 56
AG2
B
493 497Right-handed 310
Helix 57
AG3
B
500 508Right-handed alpha
Helix 58
AG4
B
536 539Right-handed 310
Helix 59
AG5
B
540 552Right-handed alpha
Helix 60
AG6
B
557 572Right-handed alpha
Helix 61
AG7
B
573 578Right-handed alpha
Helix 62
AG8
B
585 587Right-handed 310
Helix 63
AG9
B
588 607Right-handed alpha
Helix 64
AH1
B
618 626Right-handed alpha
Helix 65
AH2
C
96 102Right-handed alpha
Helix 66
AH3
C
108 112Right-handed 310
Helix 67
AH4
C
113 120Right-handed alpha
Helix 68
AH5
C
132 145Right-handed alpha
Helix 69
AH6
C
149 162Right-handed alpha
Helix 70
AH7
C
164 175Right-handed alpha
Helix 71
AH8
C
175 184Right-handed alpha
Helix 72
AH9
C
186 194Right-handed alpha
Helix 73
AI1
C
210 212Right-handed 310
Helix 74
AI2
C
214 221Right-handed alpha
Helix 75
AI3
C
244 248Right-handed 310
Helix 76
AI4
C
249 264Right-handed alpha
Helix 77
AI5
C
266 268Right-handed 310
Helix 78
AI6
C
281 287Right-handed alpha
Helix 79
AI7
C
300 319Right-handed alpha
Helix 80
AI8
C
330 342Right-handed alpha
Helix 81
AI9
C
352 371Right-handed alpha
Helix 82
AJ1
C
385 400Right-handed alpha
Helix 83
AJ2
C
406 411Right-handed alpha
Helix 84
AJ3
C
447 456Right-handed alpha
Helix 85
AJ4
C
471 482Right-handed alpha
Helix 86
AJ5
C
500 507Right-handed alpha
Helix 87
AJ6
C
536 539Right-handed 310
Helix 88
AJ7
C
540 552Right-handed alpha
Helix 89
AJ8
C
557 572Right-handed alpha
Helix 90
AJ9
C
573 578Right-handed alpha
Helix 91
AK1
C
585 587Right-handed 310
Helix 92
AK2
C
588 607Right-handed alpha
Helix 93
AK3
C
618 626Right-handed alpha
Helix 94
AK4
D
96 102Right-handed alpha
Helix 95
AK5
D
108 112Right-handed 310
Helix 96
AK6
D
113 120Right-handed alpha
Helix 97
AK7
D
132 145Right-handed alpha
Helix 98
AK8
D
149 162Right-handed alpha
Helix 99
AK9
D
164 175Right-handed alpha
Helix 100
AL1
D
175 184Right-handed alpha
Helix 101
AL2
D
186 194Right-handed alpha
Helix 102
AL3
D
210 212Right-handed 310
Helix 103
AL4
D
214 221Right-handed alpha
Helix 104
AL5
D
244 248Right-handed 310
Helix 105
AL6
D
249 264Right-handed alpha
Helix 106
AL7
D
266 268Right-handed 310
Helix 107
AL8
D
281 287Right-handed alpha
Helix 108
AL9
D
300 319Right-handed alpha
Helix 109
AM1
D
330 342Right-handed alpha
Helix 110
AM2
D
352 364Right-handed alpha
Helix 111
AM3
D
385 398Right-handed alpha
Helix 112
AM4
D
536 539Right-handed 310
Helix 113
AM5
D
540 552Right-handed alpha
Helix 114
AM6
D
557 571Right-handed alpha
Helix 115
AM7
D
585 587Right-handed 310
Helix 116
AM8
D
588 607Right-handed alpha
Helix 117
AM9
D
618 626Right-handed alpha
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There are 11 sheets in PDB entry 6C7N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 94first strand
Strand 2
C
90 94anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 208first strand
Strand 2
A
270 276parallel
Strand 3
A
229 233parallel
Strand 4
A
323 326parallel
Strand 5
A
346 349parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
421 422first strand
Strand 2
A
414 418anti-parallel
Strand 3
A
379 382parallel
Strand 4
A
459 462parallel
Strand 5
A
486 489parallel
Strand 6
A
513 516parallel
Strand 7
A
533 534parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
523 525first strand
Strand 2
A
528 530anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 94first strand
Strand 2
D
90 94anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
205 208first strand
Strand 2
B
270 276parallel
Strand 3
B
229 233parallel
Strand 4
B
323 326parallel
Strand 5
B
346 349parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
421 422first strand
Strand 2
B
414 418anti-parallel
Strand 3
B
379 382parallel
Strand 4
B
459 462parallel
Strand 5
B
486 489parallel
Strand 6
B
513 516parallel
Strand 7
B
533 534parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
523 525first strand
Strand 2
B
528 530anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
205 208first strand
Strand 2
C
270 276parallel
Strand 3
C
229 233parallel
Strand 4
C
323 326parallel
Strand 5
C
346 349parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
415 417first strand
Strand 2
C
379 382parallel
Strand 3
C
459 462parallel
Strand 4
C
486 489parallel
Strand 5
C
513 516parallel
Strand 6
C
533 534parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
205 208first strand
Strand 2
D
270 276parallel
Strand 3
D
229 233parallel
Strand 4
D
323 326parallel
Strand 5
D
346 349parallel
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