Analysis of interatomic Contacts of Structural Units in PDB entry:
6C7P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C7P entry

There are 2 chains in PDB entry 6C7P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 11THR 490
A
 SER 11THR 490
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6C7P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
16 23Right-handed alpha
Helix 2
AA2
B
67 71Right-handed 310
Helix 3
AA3
B
95 103Right-handed alpha
Helix 4
AA4
B
190 194Right-handed 310
Helix 5
AA5
B
258 263Right-handed alpha
Helix 6
AA6
B
333 337Right-handed 310
Helix 7
AA7
B
338 342Right-handed 310
Helix 8
AA8
B
375 379Right-handed 310
Helix 9
AA9
A
16 23Right-handed alpha
Helix 10
AB1
A
67 71Right-handed 310
Helix 11
AB2
A
95 103Right-handed alpha
Helix 12
AB3
A
190 194Right-handed 310
Helix 13
AB4
A
258 263Right-handed alpha
Helix 14
AB5
A
268 270Right-handed 310
Helix 15
AB6
A
333 337Right-handed 310
Helix 16
AB7
A
338 342Right-handed 310
Helix 17
AB8
A
375 379Right-handed 310
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There are 20 sheets in PDB entry 6C7P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 34first strand
Strand 2
B
87 92anti-parallel
Strand 3
B
74 80anti-parallel
Strand 4
B
48 52anti-parallel
Strand 5
B
485 488anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 40first strand
Strand 2
B
471 474anti-parallel
Strand 3
B
454 461anti-parallel
Strand 4
B
441 449anti-parallel
Strand 5
B
422 423anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 40first strand
Strand 2
B
471 474anti-parallel
Strand 3
B
454 461anti-parallel
Strand 4
B
441 449anti-parallel
Strand 5
B
428 431anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 60first strand
Strand 2
B
63 64anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 140first strand
Strand 2
B
145 148anti-parallel
Strand 3
B
155 157anti-parallel
Strand 4
B
164 167anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 187first strand
Strand 2
B
198 205anti-parallel
Strand 3
B
209 217anti-parallel
Strand 4
B
223 232anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
241 242first strand
Strand 2
B
246 251anti-parallel
Strand 3
B
280 286anti-parallel
Strand 4
B
293 297anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 256first strand
Strand 2
B
272 274anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
301 311first strand
Strand 2
B
314 322anti-parallel
Strand 3
B
345 353anti-parallel
Strand 4
B
358 365anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
369 373first strand
Strand 2
B
385 390anti-parallel
Strand 3
B
402 407anti-parallel
Strand 4
B
413 417anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 34first strand
Strand 2
A
87 92anti-parallel
Strand 3
A
74 80anti-parallel
Strand 4
A
48 52anti-parallel
Strand 5
A
485 488anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
471 474anti-parallel
Strand 3
A
454 461anti-parallel
Strand 4
A
441 449anti-parallel
Strand 5
A
422 423anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
471 474anti-parallel
Strand 3
A
454 461anti-parallel
Strand 4
A
441 449anti-parallel
Strand 5
A
428 431anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 60first strand
Strand 2
A
63 64anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 140first strand
Strand 2
A
145 148anti-parallel
Strand 3
A
155 157anti-parallel
Strand 4
A
164 167anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 187first strand
Strand 2
A
198 205anti-parallel
Strand 3
A
209 217anti-parallel
Strand 4
A
223 232anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 242first strand
Strand 2
A
246 251anti-parallel
Strand 3
A
280 286anti-parallel
Strand 4
A
293 297anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 256first strand
Strand 2
A
272 274anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 311first strand
Strand 2
A
314 322anti-parallel
Strand 3
A
345 353anti-parallel
Strand 4
A
358 365anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 373first strand
Strand 2
A
385 390anti-parallel
Strand 3
A
402 407anti-parallel
Strand 4
A
413 417anti-parallel
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