Analysis of interatomic Contacts of Structural Units in PDB entry:
6C7S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C7S entry

There is 1 chain in PDB entry 6C7S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 473
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6C7S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 22Right-handed alpha
Helix 2
AA2
A
46 56Right-handed alpha
Helix 3
AA3
A
58 64Right-handed alpha
Helix 4
AA4
A
97 112Right-handed alpha
Helix 5
AA5
A
155 162Right-handed alpha
Helix 6
AA6
A
184 196Right-handed alpha
Helix 7
AA7
A
229 242Right-handed alpha
Helix 8
AA8
A
275 277Right-handed 310
Helix 9
AA9
A
287 308Right-handed alpha
Helix 10
AB1
A
316 341Right-handed alpha
Helix 11
AB2
A
344 358Right-handed alpha
Helix 12
AB3
A
360 372Right-handed alpha
Helix 13
AB4
A
400 405Right-handed 310
Helix 14
AB5
A
457 470Right-handed alpha
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There are 6 sheets in PDB entry 6C7S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 118first strand
Strand 2
A
27 31parallel
Strand 3
A
2 7parallel
Strand 4
A
141 149parallel
Strand 5
A
132 136anti-parallel
Strand 6
A
122 127anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 118first strand
Strand 2
A
27 31parallel
Strand 3
A
2 7parallel
Strand 4
A
141 149parallel
Strand 5
A
271 273parallel
Strand 6
A
267 268anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
93 95anti-parallel
Strand 3
A
67 69anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 168first strand
Strand 2
A
260 262anti-parallel
Strand 3
A
279 280anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 206first strand
Strand 2
A
212 217anti-parallel
Strand 3
A
173 180anti-parallel
Strand 4
A
248 257anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
428 432first strand
Strand 2
A
410 414parallel
Strand 3
A
442 445anti-parallel
Strand 4
A
451 455anti-parallel
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