Analysis of interatomic Contacts of Structural Units in PDB entry:
6C8F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C8F entry

There is 1 chain in PDB entry 6C8F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 144TRP 784
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6C8F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
146 157Right-handed alpha
Helix 2
AA2
A
158 163Right-handed 310
Helix 3
AA3
A
164 172Right-handed alpha
Helix 4
AA4
A
189 197Right-handed alpha
Helix 5
AA5
A
204 217Right-handed alpha
Helix 6
AA6
A
218 223Right-handed alpha
Helix 7
AA7
A
236 244Right-handed alpha
Helix 8
AA8
A
246 256Right-handed alpha
Helix 9
AA9
A
283 291Right-handed alpha
Helix 10
AB1
A
293 302Right-handed alpha
Helix 11
AB2
A
319 327Right-handed alpha
Helix 12
AB3
A
333 353Right-handed alpha
Helix 13
AB4
A
357 361Right-handed 310
Helix 14
AB5
A
368 376Right-handed alpha
Helix 15
AB6
A
379 387Right-handed alpha
Helix 16
AB7
A
428 436Right-handed alpha
Helix 17
AB8
A
441 446Right-handed alpha
Helix 18
AB9
A
448 486Right-handed alpha
Helix 19
AC1
A
500 530Right-handed alpha
Helix 20
AC2
A
543 566Right-handed alpha
Helix 21
AC3
A
569 584Right-handed alpha
Helix 22
AC4
A
585 588Right-handed 310
Helix 23
AC5
A
598 632Right-handed alpha
Helix 24
AC6
A
660 675Right-handed alpha
Helix 25
AC7
A
687 715Right-handed alpha
Helix 26
AC8
A
720 725Right-handed alpha
Helix 27
AC9
A
727 744Right-handed alpha
Helix 28
AD1
A
745 750Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6C8F.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 403first strand
Strand 2
A
410 416anti-parallel
Strand 3
A
771 779anti-parallel
Strand 4
A
756 758anti-parallel
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