Analysis of interatomic Contacts of Structural Units in PDB entry:
6CAA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CAA entry

There are 2 chains in PDB entry 6CAA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 401LYS 965
B
 GLY 401LYS 965
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6CAA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
402 410Right-handed alpha
Helix 2
AA2
A
412 418Right-handed alpha
Helix 3
AA3
A
423 445Right-handed alpha
Helix 4
AA4
A
446 450Right-handed 310
Helix 5
AA5
A
458 470Right-handed alpha
Helix 6
AA6
A
485 499Right-handed alpha
Helix 7
AA7
A
506 528Right-handed alpha
Helix 8
AA8
A
531 536Right-handed alpha
Helix 9
AA9
A
541 567Right-handed alpha
Helix 10
AB1
A
648 669Right-handed alpha
Helix 11
AB2
A
670 672Right-handed 310
Helix 12
AB3
A
676 684Right-handed alpha
Helix 13
AB4
A
686 702Right-handed alpha
Helix 14
AB5
A
736 740Right-handed alpha
Helix 15
AB6
A
740 764Right-handed alpha
Helix 16
AB7
A
776 792Right-handed alpha
Helix 17
AB8
A
802 811Right-handed alpha
Helix 18
AB9
A
834 845Right-handed alpha
Helix 19
AC1
A
850 855Right-handed alpha
Helix 20
AC2
A
857 873Right-handed alpha
Helix 21
AC3
A
876 883Right-handed alpha
Helix 22
AC4
A
902 926Right-handed alpha
Helix 23
AC5
A
933 946Right-handed alpha
Helix 24
AC6
A
947 949Right-handed 310
Helix 25
AC7
B
402 410Right-handed alpha
Helix 26
AC8
B
412 418Right-handed alpha
Helix 27
AC9
B
423 445Right-handed alpha
Helix 28
AD1
B
446 450Right-handed 310
Helix 29
AD2
B
458 470Right-handed alpha
Helix 30
AD3
B
485 499Right-handed alpha
Helix 31
AD4
B
506 528Right-handed alpha
Helix 32
AD5
B
531 536Right-handed alpha
Helix 33
AD6
B
541 567Right-handed alpha
Helix 34
AD7
B
648 669Right-handed alpha
Helix 35
AD8
B
670 672Right-handed 310
Helix 36
AD9
B
676 684Right-handed alpha
Helix 37
AE1
B
686 702Right-handed alpha
Helix 38
AE2
B
736 740Right-handed alpha
Helix 39
AE3
B
740 764Right-handed alpha
Helix 40
AE4
B
776 792Right-handed alpha
Helix 41
AE5
B
802 811Right-handed alpha
Helix 42
AE6
B
834 845Right-handed alpha
Helix 43
AE7
B
850 855Right-handed alpha
Helix 44
AE8
B
857 873Right-handed alpha
Helix 45
AE9
B
876 883Right-handed alpha
Helix 46
AF1
B
902 926Right-handed alpha
Helix 47
AF2
B
933 946Right-handed alpha
Helix 48
AF3
B
947 949Right-handed 310
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There are 4 sheets in PDB entry 6CAA. Click on sheet of interest to get list of strands forming it: 1, 2, 3, 4,

There are 1 strands in 1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 483first strand
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There are 1 strands in 2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
798 799first strand
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There are 1 strands in 3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
482 483first strand
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There are 1 strands in 4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
798 799first strand
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