Analysis of interatomic Contacts of Structural Units in PDB entry:
6CAM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CAM entry

There is 1 chain in PDB entry 6CAM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 125GLU 475
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6CAM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
125 175Right-handed alpha
Helix 2
AA2
A
176 178Right-handed 310
Helix 3
AA3
A
179 184Right-handed alpha
Helix 4
AA4
A
207 215Right-handed alpha
Helix 5
AA5
A
218 223Right-handed alpha
Helix 6
AA6
A
224 228Right-handed 310
Helix 7
AA7
A
229 231Right-handed 310
Helix 8
AA8
A
392 396Right-handed 310
Helix 9
AA9
A
420 425Right-handed 310
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There are 6 sheets in PDB entry 6CAM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 188first strand
Strand 2
A
266 267anti-parallel
Strand 3
A
270 271anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 200first strand
Strand 2
A
255 260anti-parallel
Strand 3
A
274 283anti-parallel
Strand 4
A
317 327anti-parallel
Strand 5
A
435 442anti-parallel
Strand 6
A
356 363anti-parallel
Strand 7
A
350 353anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 200first strand
Strand 2
A
255 260anti-parallel
Strand 3
A
274 283anti-parallel
Strand 4
A
317 327anti-parallel
Strand 5
A
435 442anti-parallel
Strand 6
A
356 363anti-parallel
Strand 7
A
383 386anti-parallel
Strand 8
A
377 380anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 206first strand
Strand 2
A
233 234anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 250first strand
Strand 2
A
290 295anti-parallel
Strand 3
A
303 307anti-parallel
Strand 4
A
448 452anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
342 345first strand
Strand 2
A
426 429anti-parallel
Strand 3
A
368 370anti-parallel
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