Analysis of interatomic Contacts of Structural Units in PDB entry:
6CAU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CAU entry

There is 1 chain in PDB entry 6CAU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 16GLY 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6CAU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 45Right-handed alpha
Helix 2
AA2
A
57 66Right-handed alpha
Helix 3
AA3
A
75 80Right-handed 310
Helix 4
AA4
A
95 104Right-handed alpha
Helix 5
AA5
A
111 120Right-handed alpha
Helix 6
AA6
A
132 147Right-handed alpha
Helix 7
AA7
A
180 188Right-handed 310
Helix 8
AA8
A
209 223Right-handed alpha
Helix 9
AA9
A
236 243Right-handed alpha
Helix 10
AB1
A
244 246Right-handed 310
Helix 11
AB2
A
293 310Right-handed alpha
Helix 12
AB3
A
313 323Right-handed alpha
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There are 3 sheets in PDB entry 6CAU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 72first strand
Strand 2
A
48 53parallel
Strand 3
A
24 28parallel
Strand 4
A
84 87parallel
Strand 5
A
108 110parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 167first strand
Strand 2
A
152 154anti-parallel
Strand 3
A
173 177parallel
Strand 4
A
123 128parallel
Strand 5
A
192 195parallel
Strand 6
A
229 233parallel
Strand 7
A
250 254parallel
Strand 8
A
261 269parallel
Strand 9
A
272 279anti-parallel
Strand 10
A
285 289anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
327 328anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il