Analysis of interatomic Contacts of Structural Units in PDB entry:
6CBL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6CBL entry

There are 8 chains in PDB entry 6CBL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 6	LEU 414
B	SER 6	LEU 414
C	SER 6	LEU 414
D	SER 6	LEU 414
E	SER 6	LEU 414
F	SER 6	LEU 414
G	SER 6	LEU 414
H	SER 6	LEU 414

There are132 helices in PDB entry 6CBL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	57	69	Right-handed alpha
Helix 2	AA2	A	79	94	Right-handed alpha
Helix 3	AA3	A	103	120	Right-handed alpha
Helix 4	AA4	A	133	137	Right-handed 310
Helix 5	AA5	A	156	164	Right-handed alpha
Helix 6	AA6	A	165	168	Right-handed 310
Helix 7	AA7	A	183	197	Right-handed alpha
Helix 8	AA8	A	249	255	Right-handed 310
Helix 9	AA9	A	262	278	Right-handed alpha
Helix 10	AB1	A	279	303	Right-handed alpha
Helix 11	AB2	A	322	336	Right-handed alpha
Helix 12	AB3	A	353	371	Right-handed alpha
Helix 13	AB4	A	372	375	Right-handed 310
Helix 14	AB5	A	381	394	Right-handed alpha
Helix 15	AB6	A	402	414	Right-handed alpha
Helix 16	AB7	B	45	50	Right-handed alpha
Helix 17	AB8	B	57	69	Right-handed alpha
Helix 18	AB9	B	79	94	Right-handed alpha
Helix 19	AC1	B	103	120	Right-handed alpha
Helix 20	AC2	B	133	137	Right-handed 310
Helix 21	AC3	B	156	165	Right-handed alpha
Helix 22	AC4	B	166	168	Right-handed 310
Helix 23	AC5	B	183	198	Right-handed alpha
Helix 24	AC6	B	245	250	Right-handed alpha
Helix 25	AC7	B	251	255	Right-handed 310
Helix 26	AC8	B	262	277	Right-handed alpha
Helix 27	AC9	B	279	303	Right-handed alpha
Helix 28	AD1	B	322	336	Right-handed alpha
Helix 29	AD2	B	353	371	Right-handed alpha
Helix 30	AD3	B	372	375	Right-handed 310
Helix 31	AD4	B	381	394	Right-handed alpha
Helix 32	AD5	B	402	414	Right-handed alpha
Helix 33	AD6	C	45	50	Right-handed alpha
Helix 34	AD7	C	57	68	Right-handed alpha
Helix 35	AD8	C	79	94	Right-handed alpha
Helix 36	AD9	C	103	120	Right-handed alpha
Helix 37	AE1	C	133	137	Right-handed 310
Helix 38	AE2	C	156	164	Right-handed alpha
Helix 39	AE3	C	166	168	Right-handed 310
Helix 40	AE4	C	183	198	Right-handed alpha
Helix 41	AE5	C	245	250	Right-handed alpha
Helix 42	AE6	C	251	255	Right-handed 310
Helix 43	AE7	C	262	278	Right-handed alpha
Helix 44	AE8	C	279	303	Right-handed alpha
Helix 45	AE9	C	322	337	Right-handed alpha
Helix 46	AF1	C	353	371	Right-handed alpha
Helix 47	AF2	C	372	375	Right-handed 310
Helix 48	AF3	C	381	394	Right-handed alpha
Helix 49	AF4	C	402	414	Right-handed alpha
Helix 50	AF5	D	45	50	Right-handed alpha
Helix 51	AF6	D	57	69	Right-handed alpha
Helix 52	AF7	D	79	94	Right-handed alpha
Helix 53	AF8	D	103	120	Right-handed alpha
Helix 54	AF9	D	133	137	Right-handed 310
Helix 55	AG1	D	156	165	Right-handed alpha
Helix 56	AG2	D	166	168	Right-handed 310
Helix 57	AG3	D	183	198	Right-handed alpha
Helix 58	AG4	D	249	255	Right-handed 310
Helix 59	AG5	D	257	261	Right-handed 310
Helix 60	AG6	D	262	278	Right-handed alpha
Helix 61	AG7	D	279	303	Right-handed alpha
Helix 62	AG8	D	322	337	Right-handed alpha
Helix 63	AG9	D	353	371	Right-handed alpha
Helix 64	AH1	D	372	375	Right-handed 310
Helix 65	AH2	D	381	394	Right-handed alpha
Helix 66	AH3	D	402	414	Right-handed alpha
Helix 67	AH4	E	45	50	Right-handed alpha
Helix 68	AH5	E	57	69	Right-handed alpha
Helix 69	AH6	E	79	94	Right-handed alpha
Helix 70	AH7	E	103	120	Right-handed alpha
Helix 71	AH8	E	133	137	Right-handed 310
Helix 72	AH9	E	156	164	Right-handed alpha
Helix 73	AI1	E	165	168	Right-handed 310
Helix 74	AI2	E	183	197	Right-handed alpha
Helix 75	AI3	E	218	223	Right-handed alpha
Helix 76	AI4	E	249	255	Right-handed 310
Helix 77	AI5	E	262	278	Right-handed alpha
Helix 78	AI6	E	279	303	Right-handed alpha
Helix 79	AI7	E	322	337	Right-handed alpha
Helix 80	AI8	E	353	371	Right-handed alpha
Helix 81	AI9	E	372	375	Right-handed 310
Helix 82	AJ1	E	381	394	Right-handed alpha
Helix 83	AJ2	E	402	414	Right-handed alpha
Helix 84	AJ3	F	45	50	Right-handed alpha
Helix 85	AJ4	F	57	69	Right-handed alpha
Helix 86	AJ5	F	79	94	Right-handed alpha
Helix 87	AJ6	F	103	120	Right-handed alpha
Helix 88	AJ7	F	133	137	Right-handed 310
Helix 89	AJ8	F	156	164	Right-handed alpha
Helix 90	AJ9	F	165	168	Right-handed 310
Helix 91	AK1	F	183	198	Right-handed alpha
Helix 92	AK2	F	249	255	Right-handed 310
Helix 93	AK3	F	257	261	Right-handed 310
Helix 94	AK4	F	262	278	Right-handed alpha
Helix 95	AK5	F	279	303	Right-handed alpha
Helix 96	AK6	F	322	337	Right-handed alpha
Helix 97	AK7	F	353	371	Right-handed alpha
Helix 98	AK8	F	372	375	Right-handed 310
Helix 99	AK9	F	381	394	Right-handed alpha
Helix 100	AL1	F	402	414	Right-handed alpha
Helix 101	AL2	G	45	50	Right-handed alpha
Helix 102	AL3	G	57	69	Right-handed alpha
Helix 103	AL4	G	79	94	Right-handed alpha
Helix 104	AL5	G	103	120	Right-handed alpha
Helix 105	AL6	G	133	137	Right-handed 310
Helix 106	AL7	G	156	164	Right-handed alpha
Helix 107	AL8	G	166	168	Right-handed 310
Helix 108	AL9	G	183	198	Right-handed alpha
Helix 109	AM1	G	245	250	Right-handed alpha
Helix 110	AM2	G	251	255	Right-handed 310
Helix 111	AM3	G	262	278	Right-handed alpha
Helix 112	AM4	G	279	303	Right-handed alpha
Helix 113	AM5	G	322	337	Right-handed alpha
Helix 114	AM6	G	353	371	Right-handed alpha
Helix 115	AM7	G	372	375	Right-handed 310
Helix 116	AM8	G	381	394	Right-handed alpha
Helix 117	AM9	G	402	414	Right-handed alpha
Helix 118	AN1	H	45	50	Right-handed alpha
Helix 119	AN2	H	57	69	Right-handed alpha
Helix 120	AN3	H	79	94	Right-handed alpha
Helix 121	AN4	H	103	120	Right-handed alpha
Helix 122	AN5	H	133	137	Right-handed 310
Helix 123	AN6	H	156	164	Right-handed alpha
Helix 124	AN7	H	183	198	Right-handed alpha
Helix 125	AN8	H	249	255	Right-handed 310
Helix 126	AN9	H	262	278	Right-handed alpha
Helix 127	AO1	H	279	303	Right-handed alpha
Helix 128	AO2	H	322	337	Right-handed alpha
Helix 129	AO3	H	353	371	Right-handed alpha
Helix 130	AO4	H	372	375	Right-handed 310
Helix 131	AO5	H	381	394	Right-handed alpha
Helix 132	AO6	H	402	414	Right-handed alpha

There are 24 sheets in PDB entry 6CBL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	29	first strand
Strand 2	A	32	35	anti-parallel
Strand 3	A	40	43	anti-parallel
Strand 4	A	338	339	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	101	first strand
Strand 2	A	240	244	anti-parallel
Strand 3	A	226	229	anti-parallel
Strand 4	A	200	205	parallel
Strand 5	A	170	175	parallel
Strand 6	A	123	127	parallel
Strand 7	A	150	152	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	307	311	first strand
Strand 2	A	316	320	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	29	first strand
Strand 2	B	32	35	anti-parallel
Strand 3	B	40	43	anti-parallel
Strand 4	B	338	339	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	101	first strand
Strand 2	B	240	244	anti-parallel
Strand 3	B	226	229	anti-parallel
Strand 4	B	200	205	parallel
Strand 5	B	170	175	parallel
Strand 6	B	123	127	parallel
Strand 7	B	150	152	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	307	311	first strand
Strand 2	B	316	320	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	29	first strand
Strand 2	C	32	35	anti-parallel
Strand 3	C	40	43	anti-parallel
Strand 4	C	338	339	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	97	101	first strand
Strand 2	C	240	244	anti-parallel
Strand 3	C	226	229	anti-parallel
Strand 4	C	200	205	parallel
Strand 5	C	170	175	parallel
Strand 6	C	123	127	parallel
Strand 7	C	150	152	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	307	311	first strand
Strand 2	C	316	320	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	25	29	first strand
Strand 2	D	32	35	anti-parallel
Strand 3	D	40	43	anti-parallel
Strand 4	D	338	339	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	97	101	first strand
Strand 2	D	240	244	anti-parallel
Strand 3	D	226	229	anti-parallel
Strand 4	D	200	205	parallel
Strand 5	D	170	175	parallel
Strand 6	D	123	127	parallel
Strand 7	D	150	152	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	307	311	first strand
Strand 2	D	316	320	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	25	29	first strand
Strand 2	E	32	35	anti-parallel
Strand 3	E	40	43	anti-parallel
Strand 4	E	338	339	parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	97	101	first strand
Strand 2	E	240	244	anti-parallel
Strand 3	E	226	229	anti-parallel
Strand 4	E	200	205	parallel
Strand 5	E	170	175	parallel
Strand 6	E	123	127	parallel
Strand 7	E	150	152	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	307	311	first strand
Strand 2	E	316	320	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	25	29	first strand
Strand 2	F	32	35	anti-parallel
Strand 3	F	40	43	anti-parallel
Strand 4	F	338	339	parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	97	101	first strand
Strand 2	F	240	244	anti-parallel
Strand 3	F	226	229	anti-parallel
Strand 4	F	200	205	parallel
Strand 5	F	170	175	parallel
Strand 6	F	123	127	parallel
Strand 7	F	150	152	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	307	311	first strand
Strand 2	F	316	320	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	25	29	first strand
Strand 2	G	32	35	anti-parallel
Strand 3	G	40	43	anti-parallel
Strand 4	G	338	339	parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	97	101	first strand
Strand 2	G	240	244	anti-parallel
Strand 3	G	226	229	anti-parallel
Strand 4	G	200	205	parallel
Strand 5	G	170	175	parallel
Strand 6	G	123	127	parallel
Strand 7	G	150	152	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	307	311	first strand
Strand 2	G	316	320	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	25	29	first strand
Strand 2	H	32	35	anti-parallel
Strand 3	H	40	43	anti-parallel
Strand 4	H	338	339	parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	97	101	first strand
Strand 2	H	240	244	anti-parallel
Strand 3	H	226	229	anti-parallel
Strand 4	H	200	205	parallel
Strand 5	H	170	175	parallel
Strand 6	H	123	127	parallel
Strand 7	H	150	152	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	307	311	first strand
Strand 2	H	316	320	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6CBL

Analysis of interatomic Contacts of Structural Units in PDB entry:
6CBL