Analysis of interatomic Contacts of Structural Units in PDB entry:
6CC0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CC0 entry

There are 2 chains in PDB entry 6CC0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4ASN 237
B
 ARG 5ASN 237
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6CC0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 13Right-handed alpha
Helix 2
AA2
A
17 32Right-handed alpha
Helix 3
AA3
A
59 69Right-handed alpha
Helix 4
AA4
A
70 74Right-handed 310
Helix 5
AA5
A
75 84Right-handed alpha
Helix 6
AA6
A
93 95Right-handed 310
Helix 7
AA7
A
98 108Right-handed alpha
Helix 8
AA8
A
121 123Right-handed 310
Helix 9
AA9
A
138 169Right-handed alpha
Helix 10
AB1
A
170 174Right-handed 310
Helix 11
AB2
A
177 188Right-handed alpha
Helix 12
AB3
A
192 201Right-handed alpha
Helix 13
AB4
A
203 218Right-handed alpha
Helix 14
AB5
A
222 234Right-handed alpha
Helix 15
AB6
B
7 14Right-handed alpha
Helix 16
AB7
B
17 32Right-handed alpha
Helix 17
AB8
B
59 69Right-handed alpha
Helix 18
AB9
B
70 74Right-handed 310
Helix 19
AC1
B
75 82Right-handed alpha
Helix 20
AC2
B
93 95Right-handed 310
Helix 21
AC3
B
98 108Right-handed alpha
Helix 22
AC4
B
121 123Right-handed 310
Helix 23
AC5
B
138 169Right-handed alpha
Helix 24
AC6
B
170 174Right-handed 310
Helix 25
AC7
B
177 189Right-handed alpha
Helix 26
AC8
B
192 201Right-handed alpha
Helix 27
AC9
B
203 218Right-handed alpha
Helix 28
AD1
B
222 233Right-handed alpha
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There are 2 sheets in PDB entry 6CC0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 56first strand
Strand 2
A
36 42anti-parallel
Strand 3
A
125 132anti-parallel
Strand 4
A
112 119anti-parallel
Strand 5
A
88 91anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 56first strand
Strand 2
B
36 42anti-parallel
Strand 3
B
125 132anti-parallel
Strand 4
B
112 119anti-parallel
Strand 5
B
88 91anti-parallel
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