Analysis of interatomic Contacts of Structural Units in PDB entry:
6CC2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CC2 entry

There are 2 chains in PDB entry 6CC2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1LYS 538
A
 PHE 540SER 542
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6CC2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 6Right-handed 310
Helix 2
AA2
A
7 21Right-handed alpha
Helix 3
AA3
A
32 49Right-handed alpha
Helix 4
AA4
A
60 72Right-handed alpha
Helix 5
AA5
A
90 96Right-handed alpha
Helix 6
AA6
A
113 119Right-handed alpha
Helix 7
AA7
A
181 193Right-handed alpha
Helix 8
AA8
A
198 214Right-handed alpha
Helix 9
AA9
A
218 234Right-handed alpha
Helix 10
AB1
A
261 265Right-handed 310
Helix 11
AB2
A
266 274Right-handed alpha
Helix 12
AB3
A
274 282Right-handed alpha
Helix 13
AB4
A
287 299Right-handed alpha
Helix 14
AB5
A
302 307Right-handed alpha
Helix 15
AB6
A
314 332Right-handed alpha
Helix 16
AB7
A
334 336Right-handed 310
Helix 17
AB8
A
353 365Right-handed alpha
Helix 18
AB9
A
373 386Right-handed alpha
Helix 19
AC1
A
392 418Right-handed alpha
Helix 20
AC2
A
434 442Right-handed alpha
Helix 21
AC3
A
443 463Right-handed alpha
Helix 22
AC4
A
487 492Right-handed 310
Helix 23
AC5
A
493 509Right-handed alpha
Helix 24
AC6
A
528 540Right-handed alpha
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There are 4 sheets in PDB entry 6CC2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
122 125parallel
Strand 3
A
102 106parallel
Strand 4
A
77 83parallel
Strand 5
A
24 29parallel
Strand 6
A
53 57parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 110first strand
Strand 2
A
177 178anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 238first strand
Strand 2
A
251 257parallel
Strand 3
A
338 344anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 423first strand
Strand 2
A
427 432anti-parallel
Strand 3
A
468 474parallel
Strand 4
A
479 485anti-parallel
Strand 5
A
519 525anti-parallel
Strand 6
A
514 515anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il