Analysis of interatomic Contacts of Structural Units in PDB entry:
6CC7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CC7 entry

There is 1 chain in PDB entry 6CC7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 28ARG 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6CC7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
90 94Right-handed 310
Helix 2
AA2
A
115 118Right-handed 310
Helix 3
AA3
A
194 196Right-handed 310
Helix 4
AA4
A
298 301Right-handed 310
Helix 5
AA5
A
316 320Right-handed 310
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There are 5 sheets in PDB entry 6CC7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 64first strand
Strand 2
A
67 76anti-parallel
Strand 3
A
79 85anti-parallel
Strand 4
A
99 101anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 114first strand
Strand 2
A
119 125anti-parallel
Strand 3
A
131 136anti-parallel
Strand 4
A
149 152anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 170first strand
Strand 2
A
174 180anti-parallel
Strand 3
A
185 192anti-parallel
Strand 4
A
205 209anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 258first strand
Strand 2
A
242 249anti-parallel
Strand 3
A
230 237anti-parallel
Strand 4
A
217 224anti-parallel
Strand 5
A
296 297parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 286first strand
Strand 2
A
303 309anti-parallel
Strand 3
A
322 328anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il