Analysis of interatomic Contacts of Structural Units in PDB entry:
6CCZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CCZ entry

There are 3 chains in PDB entry 6CCZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 82HIS 317
A
 SER 319VAL 533
B
 PHE 82VAL 533
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 45 helices in PDB entry 6CCZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
86 91Right-handed alpha
Helix 2
AA2
A
91 108Right-handed alpha
Helix 3
AA3
A
119 127Right-handed alpha
Helix 4
AA4
A
128 133Right-handed 310
Helix 5
AA5
A
147 165Right-handed alpha
Helix 6
AA6
A
180 193Right-handed alpha
Helix 7
AA7
A
204 207Right-handed 310
Helix 8
AA8
A
209 213Right-handed 310
Helix 9
AA9
A
222 228Right-handed alpha
Helix 10
AB1
A
243 255Right-handed alpha
Helix 11
AB2
A
271 282Right-handed alpha
Helix 12
AB3
A
293 299Right-handed alpha
Helix 13
AB4
A
304 308Right-handed 310
Helix 14
AB5
A
339 349Right-handed alpha
Helix 15
AB6
A
357 371Right-handed alpha
Helix 16
AB7
A
373 397Right-handed alpha
Helix 17
AB8
A
403 405Right-handed 310
Helix 18
AB9
A
416 419Right-handed 310
Helix 19
AC1
A
421 432Right-handed alpha
Helix 20
AC2
A
457 464Right-handed alpha
Helix 21
AC3
A
466 491Right-handed alpha
Helix 22
AC4
A
495 505Right-handed alpha
Helix 23
AC5
A
510 526Right-handed alpha
Helix 24
AC6
B
86 91Right-handed alpha
Helix 25
AC7
B
91 108Right-handed alpha
Helix 26
AC8
B
119 127Right-handed alpha
Helix 27
AC9
B
128 133Right-handed 310
Helix 28
AD1
B
147 165Right-handed alpha
Helix 29
AD2
B
180 193Right-handed alpha
Helix 30
AD3
B
204 207Right-handed 310
Helix 31
AD4
B
222 228Right-handed alpha
Helix 32
AD5
B
243 255Right-handed alpha
Helix 33
AD6
B
271 282Right-handed alpha
Helix 34
AD7
B
293 299Right-handed alpha
Helix 35
AD8
B
304 308Right-handed 310
Helix 36
AD9
B
339 349Right-handed alpha
Helix 37
AE1
B
357 371Right-handed alpha
Helix 38
AE2
B
373 397Right-handed alpha
Helix 39
AE3
B
403 405Right-handed 310
Helix 40
AE4
B
416 419Right-handed 310
Helix 41
AE5
B
421 432Right-handed alpha
Helix 42
AE6
B
457 463Right-handed alpha
Helix 43
AE7
B
466 491Right-handed alpha
Helix 44
AE8
B
495 505Right-handed alpha
Helix 45
AE9
B
510 526Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 6CCZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 110first strand
Strand 2
A
434 435parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
A
141 142anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 175first strand
Strand 2
A
326 331anti-parallel
Strand 3
A
311 315anti-parallel
Strand 4
A
285 289parallel
Strand 5
A
258 261parallel
Strand 6
A
198 202parallel
Strand 7
A
229 233parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 401first strand
Strand 2
A
410 414anti-parallel
Strand 3
A
452 456anti-parallel
Strand 4
A
437 439anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 110first strand
Strand 2
B
434 435parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 138first strand
Strand 2
B
141 142anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 175first strand
Strand 2
B
326 331anti-parallel
Strand 3
B
311 315anti-parallel
Strand 4
B
285 289parallel
Strand 5
B
258 261parallel
Strand 6
B
198 202parallel
Strand 7
B
229 233parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
400 401first strand
Strand 2
B
410 414anti-parallel
Strand 3
B
452 456anti-parallel
Strand 4
B
437 439anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il