Analysis of interatomic Contacts of Structural Units in PDB entry:
6CE1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CE1 entry

There is 1 chain in PDB entry 6CE1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2PRO 664
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6CE1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
192 196Right-handed alpha
Helix 2
AA2
A
204 210Right-handed alpha
Helix 3
AA3
A
316 331Right-handed alpha
Helix 4
AA4
A
447 453Right-handed alpha
Helix 5
AA5
A
470 473Right-handed 310
Helix 6
AA6
A
494 506Right-handed alpha
Helix 7
AA7
A
528 534Right-handed alpha
Helix 8
AA8
A
534 559Right-handed alpha
Helix 9
AA9
A
562 564Right-handed 310
Helix 10
AB1
A
611 622Right-handed alpha
Helix 11
AB2
A
623 625Right-handed 310
Helix 12
AB3
A
658 662Right-handed 310
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There are 12 sheets in PDB entry 6CE1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 9first strand
Strand 2
A
24 29parallel
Strand 3
A
74 79anti-parallel
Strand 4
A
49 54anti-parallel
Strand 5
A
61 62anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 20first strand
Strand 2
A
106 120parallel
Strand 3
A
90 97anti-parallel
Strand 4
A
39 44anti-parallel
Strand 5
A
68 69anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 20first strand
Strand 2
A
106 120parallel
Strand 3
A
181 188anti-parallel
Strand 4
A
246 253anti-parallel
Strand 5
A
211 216anti-parallel
Strand 6
A
226 230anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 150first strand
Strand 2
A
282 293parallel
Strand 3
A
264 273anti-parallel
Strand 4
A
197 203anti-parallel
Strand 5
A
236 238anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 298first strand
Strand 2
A
352 358anti-parallel
Strand 3
A
363 369anti-parallel
Strand 4
A
390 393parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 336first strand
Strand 2
A
305 311parallel
Strand 3
A
648 652anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
416 418first strand
Strand 2
A
421 423anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 432first strand
Strand 2
A
459 462parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 479first strand
Strand 2
A
486 492anti-parallel
Strand 3
A
566 570parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 513first strand
Strand 2
A
526 527anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
573 576first strand
Strand 2
A
579 582anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
591 593first strand
Strand 2
A
596 600anti-parallel
Strand 3
A
627 631parallel
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