Analysis of interatomic Contacts of Structural Units in PDB entry:
6CH1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CH1 entry

There is 1 chain in PDB entry 6CH1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 359GLY 690
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6CH1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
369 376Right-handed 310
Helix 2
AA2
A
381 399Right-handed alpha
Helix 3
AA3
A
467 469Right-handed 310
Helix 4
AA4
A
470 477Right-handed alpha
Helix 5
AA5
A
484 499Right-handed alpha
Helix 6
AA6
A
499 504Right-handed alpha
Helix 7
AA7
A
505 520Right-handed alpha
Helix 8
AA8
A
520 528Right-handed alpha
Helix 9
AA9
A
533 547Right-handed alpha
Helix 10
AB1
A
553 565Right-handed alpha
Helix 11
AB2
A
570 582Right-handed alpha
Helix 12
AB3
A
582 591Right-handed alpha
Helix 13
AB4
A
603 615Right-handed alpha
Helix 14
AB5
A
621 643Right-handed alpha
Helix 15
AB6
A
651 653Right-handed 310
Helix 16
AB7
A
654 664Right-handed alpha
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There are 4 sheets in PDB entry 6CH1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
406 409first strand
Strand 2
A
364 367parallel
Strand 3
A
417 422anti-parallel
Strand 4
A
425 431anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 455first strand
Strand 2
A
462 466anti-parallel
Strand 3
A
437 440anti-parallel
Strand 4
A
480 483anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
597 602first strand
Strand 2
A
683 689parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
647 650first strand
Strand 2
A
670 673parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il