Analysis of interatomic Contacts of Structural Units in PDB entry:
6CH2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CH2 entry

There are 5 chains in PDB entry 6CH2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 360GLY 690
B
 GLY 359GLY 690
C
 GLU 360GLY 690
D
 SER 5GLY 164
E
 MET 4TYR 163
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 6CH2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
369 376Right-handed 310
Helix 2
AA2
A
381 398Right-handed alpha
Helix 3
AA3
A
467 469Right-handed 310
Helix 4
AA4
A
470 477Right-handed alpha
Helix 5
AA5
A
484 499Right-handed alpha
Helix 6
AA6
A
505 520Right-handed alpha
Helix 7
AA7
A
520 528Right-handed alpha
Helix 8
AA8
A
533 547Right-handed alpha
Helix 9
AA9
A
553 565Right-handed alpha
Helix 10
AB1
A
570 582Right-handed alpha
Helix 11
AB2
A
582 591Right-handed alpha
Helix 12
AB3
A
603 615Right-handed alpha
Helix 13
AB4
A
621 641Right-handed alpha
Helix 14
AB5
A
651 653Right-handed 310
Helix 15
AB6
A
654 663Right-handed alpha
Helix 16
AB7
B
371 376Right-handed alpha
Helix 17
AB8
B
381 398Right-handed alpha
Helix 18
AB9
B
467 469Right-handed 310
Helix 19
AC1
B
470 477Right-handed alpha
Helix 20
AC2
B
484 499Right-handed alpha
Helix 21
AC3
B
505 517Right-handed alpha
Helix 22
AC4
B
520 528Right-handed alpha
Helix 23
AC5
B
533 547Right-handed alpha
Helix 24
AC6
B
553 565Right-handed alpha
Helix 25
AC7
B
570 582Right-handed alpha
Helix 26
AC8
B
582 591Right-handed alpha
Helix 27
AC9
B
603 615Right-handed alpha
Helix 28
AD1
B
621 642Right-handed alpha
Helix 29
AD2
B
651 653Right-handed 310
Helix 30
AD3
B
654 663Right-handed alpha
Helix 31
AD4
C
371 376Right-handed alpha
Helix 32
AD5
C
381 398Right-handed alpha
Helix 33
AD6
C
470 477Right-handed alpha
Helix 34
AD7
C
484 499Right-handed alpha
Helix 35
AD8
C
499 504Right-handed alpha
Helix 36
AD9
C
505 517Right-handed alpha
Helix 37
AE1
C
520 528Right-handed alpha
Helix 38
AE2
C
533 547Right-handed alpha
Helix 39
AE3
C
553 565Right-handed alpha
Helix 40
AE4
C
570 582Right-handed alpha
Helix 41
AE5
C
582 591Right-handed alpha
Helix 42
AE6
C
603 617Right-handed alpha
Helix 43
AE7
C
623 641Right-handed alpha
Helix 44
AE8
C
651 653Right-handed 310
Helix 45
AE9
C
654 666Right-handed alpha
Helix 46
AF1
D
6 40Right-handed alpha
Helix 47
AF2
D
61 84Right-handed alpha
Helix 48
AF3
D
86 107Right-handed alpha
Helix 49
AF4
D
114 164Right-handed alpha
Helix 50
AF5
E
5 39Right-handed alpha
Helix 51
AF6
E
40 42Right-handed 310
Helix 52
AF7
E
61 84Right-handed alpha
Helix 53
AF8
E
86 107Right-handed alpha
Helix 54
AF9
E
114 163Right-handed alpha
Helix 55
AG1
F
5 36Right-handed alpha
Helix 56
AG2
F
64 84Right-handed alpha
Helix 57
AG3
F
86 107Right-handed alpha
Helix 58
AG4
F
117 163Right-handed alpha
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There are 12 sheets in PDB entry 6CH2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
405 409first strand
Strand 2
A
363 367parallel
Strand 3
A
417 422anti-parallel
Strand 4
A
425 431anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 455first strand
Strand 2
A
462 466anti-parallel
Strand 3
A
437 440anti-parallel
Strand 4
A
480 483anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
596 602first strand
Strand 2
A
682 689parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
647 650first strand
Strand 2
A
670 673parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
405 409first strand
Strand 2
B
363 367parallel
Strand 3
B
417 422anti-parallel
Strand 4
B
425 431anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
452 455first strand
Strand 2
B
462 466anti-parallel
Strand 3
B
437 441anti-parallel
Strand 4
B
480 483anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
596 602first strand
Strand 2
B
682 689parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
647 650first strand
Strand 2
B
670 673parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
406 409first strand
Strand 2
C
364 367parallel
Strand 3
C
417 422anti-parallel
Strand 4
C
425 431anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
452 455first strand
Strand 2
C
462 467anti-parallel
Strand 3
C
436 441anti-parallel
Strand 4
C
480 483anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
597 602first strand
Strand 2
C
683 689parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
647 650first strand
Strand 2
C
670 673parallel
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