Analysis of interatomic Contacts of Structural Units in PDB entry:
6CHJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CHJ entry

There are 2 chains in PDB entry 6CHJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2LEU 455
B
 MET 1LEU 455
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6CHJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 15Right-handed alpha
Helix 2
AA2
A
38 48Right-handed alpha
Helix 3
AA3
A
77 81Right-handed alpha
Helix 4
AA4
A
92 105Right-handed alpha
Helix 5
AA5
A
140 151Right-handed alpha
Helix 6
AA6
A
200 213Right-handed alpha
Helix 7
AA7
A
229 233Right-handed 310
Helix 8
AA8
A
248 259Right-handed alpha
Helix 9
AA9
A
261 281Right-handed alpha
Helix 10
AB1
A
321 339Right-handed alpha
Helix 11
AB2
A
351 356Right-handed alpha
Helix 12
AB3
A
356 366Right-handed alpha
Helix 13
AB4
A
368 372Right-handed 310
Helix 14
AB5
A
436 453Right-handed alpha
Helix 15
AB6
B
5 14Right-handed alpha
Helix 16
AB7
B
38 50Right-handed alpha
Helix 17
AB8
B
77 81Right-handed alpha
Helix 18
AB9
B
92 106Right-handed alpha
Helix 19
AC1
B
140 151Right-handed alpha
Helix 20
AC2
B
199 213Right-handed alpha
Helix 21
AC3
B
248 259Right-handed alpha
Helix 22
AC4
B
261 281Right-handed alpha
Helix 23
AC5
B
321 339Right-handed alpha
Helix 24
AC6
B
344 366Right-handed alpha
Helix 25
AC7
B
368 372Right-handed 310
Helix 26
AC8
B
436 454Right-handed alpha
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There are 6 sheets in PDB entry 6CHJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 86first strand
Strand 2
A
115 121parallel
Strand 3
A
127 135anti-parallel
Strand 4
A
22 30anti-parallel
Strand 5
A
393 401anti-parallel
Strand 6
A
389 390anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 64first strand
Strand 2
A
67 72anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 247first strand
Strand 2
A
420 428anti-parallel
Strand 3
A
410 417anti-parallel
Strand 4
A
376 380parallel
Strand 5
A
290 293parallel
Strand 6
A
311 314anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 86first strand
Strand 2
B
115 121parallel
Strand 3
B
127 135anti-parallel
Strand 4
B
22 30anti-parallel
Strand 5
B
393 401anti-parallel
Strand 6
B
389 390anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 64first strand
Strand 2
B
67 72anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 247first strand
Strand 2
B
420 428anti-parallel
Strand 3
B
410 417anti-parallel
Strand 4
B
376 380parallel
Strand 5
B
290 293parallel
Strand 6
B
311 314anti-parallel
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