Analysis of interatomic Contacts of Structural Units in PDB entry:
6CHK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CHK entry

There is 1 chain in PDB entry 6CHK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 59ALA 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6CHK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
71 88Right-handed alpha
Helix 2
AA2
A
100 113Right-handed alpha
Helix 3
AA3
A
126 137Right-handed alpha
Helix 4
AA4
A
159 174Right-handed alpha
Helix 5
AA5
A
195 207Right-handed alpha
Helix 6
AA6
A
212 214Right-handed 310
Helix 7
AA7
A
222 235Right-handed alpha
Helix 8
AA8
A
249 263Right-handed alpha
Helix 9
AA9
A
281 285Right-handed 310
Helix 10
AB1
A
295 311Right-handed alpha
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There are 3 sheets in PDB entry 6CHK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 96first strand
Strand 2
A
61 66parallel
Strand 3
A
118 121parallel
Strand 4
A
141 144parallel
Strand 5
A
154 156parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 217first strand
Strand 2
A
179 182parallel
Strand 3
A
244 246parallel
Strand 4
A
272 274parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 293first strand
Strand 2
A
326 328anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il