Analysis of interatomic Contacts of Structural Units in PDB entry:
6CI9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6CI9 entry

There are 6 chains in PDB entry 6CI9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER -1	LEU 254
B	HIS 0	LEU 254
C	SER -1	ILE 256
D	SER -1	ALA 257
E	SER -1	HIS 253
F	HIS 0	ASN 91

There are192 helices in PDB entry 6CI9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	30	Right-handed alpha
Helix 2	AA2	A	40	51	Right-handed alpha
Helix 3	AA3	A	67	83	Right-handed alpha
Helix 4	AA4	A	99	103	Right-handed 310
Helix 5	AA5	A	104	116	Right-handed alpha
Helix 6	AA6	A	116	134	Right-handed alpha
Helix 7	AA7	A	154	176	Right-handed alpha
Helix 8	AA8	A	177	179	Right-handed 310
Helix 9	AA9	A	192	197	Right-handed alpha
Helix 10	AB1	A	198	208	Right-handed alpha
Helix 11	AB2	A	217	230	Right-handed alpha
Helix 12	AB3	A	231	234	Right-handed 310
Helix 13	AB4	B	17	30	Right-handed alpha
Helix 14	AB5	B	40	51	Right-handed alpha
Helix 15	AB6	B	67	83	Right-handed alpha
Helix 16	AB7	B	99	103	Right-handed 310
Helix 17	AB8	B	104	116	Right-handed alpha
Helix 18	AB9	B	116	134	Right-handed alpha
Helix 19	AC1	B	154	176	Right-handed alpha
Helix 20	AC2	B	177	179	Right-handed 310
Helix 21	AC3	B	192	197	Right-handed alpha
Helix 22	AC4	B	198	207	Right-handed alpha
Helix 23	AC5	B	217	230	Right-handed alpha
Helix 24	AC6	B	231	234	Right-handed 310
Helix 25	AC7	C	17	30	Right-handed alpha
Helix 26	AC8	C	40	51	Right-handed alpha
Helix 27	AC9	C	67	83	Right-handed alpha
Helix 28	AD1	C	99	103	Right-handed 310
Helix 29	AD2	C	104	116	Right-handed alpha
Helix 30	AD3	C	116	134	Right-handed alpha
Helix 31	AD4	C	154	176	Right-handed alpha
Helix 32	AD5	C	177	179	Right-handed 310
Helix 33	AD6	C	192	197	Right-handed alpha
Helix 34	AD7	C	199	208	Right-handed alpha
Helix 35	AD8	C	217	230	Right-handed alpha
Helix 36	AD9	C	231	234	Right-handed 310
Helix 37	AE1	D	17	30	Right-handed alpha
Helix 38	AE2	D	40	51	Right-handed alpha
Helix 39	AE3	D	67	83	Right-handed alpha
Helix 40	AE4	D	99	103	Right-handed 310
Helix 41	AE5	D	104	116	Right-handed alpha
Helix 42	AE6	D	116	134	Right-handed alpha
Helix 43	AE7	D	154	176	Right-handed alpha
Helix 44	AE8	D	177	179	Right-handed 310
Helix 45	AE9	D	192	197	Right-handed alpha
Helix 46	AF1	D	199	208	Right-handed alpha
Helix 47	AF2	D	217	230	Right-handed alpha
Helix 48	AF3	D	231	234	Right-handed 310
Helix 49	AF4	E	17	30	Right-handed alpha
Helix 50	AF5	E	40	51	Right-handed alpha
Helix 51	AF6	E	67	83	Right-handed alpha
Helix 52	AF7	E	99	103	Right-handed 310
Helix 53	AF8	E	104	116	Right-handed alpha
Helix 54	AF9	E	116	134	Right-handed alpha
Helix 55	AG1	E	154	176	Right-handed alpha
Helix 56	AG2	E	177	179	Right-handed 310
Helix 57	AG3	E	192	197	Right-handed alpha
Helix 58	AG4	E	199	208	Right-handed alpha
Helix 59	AG5	E	217	230	Right-handed alpha
Helix 60	AG6	E	231	234	Right-handed 310
Helix 61	AG7	F	17	30	Right-handed alpha
Helix 62	AG8	F	40	51	Right-handed alpha
Helix 63	AG9	F	67	83	Right-handed alpha
Helix 64	AH1	F	99	103	Right-handed 310
Helix 65	AH2	F	104	116	Right-handed alpha
Helix 66	AH3	F	116	134	Right-handed alpha
Helix 67	AH4	F	154	176	Right-handed alpha
Helix 68	AH5	F	194	197	Right-handed 310
Helix 69	AH6	F	198	209	Right-handed alpha
Helix 70	AH7	F	217	230	Right-handed alpha
Helix 71	AH8	F	231	234	Right-handed 310
Helix 72	AH9	G	17	30	Right-handed alpha
Helix 73	AI1	G	40	51	Right-handed alpha
Helix 74	AI2	G	67	83	Right-handed alpha
Helix 75	AI3	G	99	103	Right-handed 310
Helix 76	AI4	G	104	116	Right-handed alpha
Helix 77	AI5	G	116	134	Right-handed alpha
Helix 78	AI6	G	154	176	Right-handed alpha
Helix 79	AI7	G	177	179	Right-handed 310
Helix 80	AI8	G	192	197	Right-handed alpha
Helix 81	AI9	G	198	208	Right-handed alpha
Helix 82	AJ1	G	217	230	Right-handed alpha
Helix 83	AJ2	G	231	234	Right-handed 310
Helix 84	AJ3	H	17	30	Right-handed alpha
Helix 85	AJ4	H	40	51	Right-handed alpha
Helix 86	AJ5	H	67	83	Right-handed alpha
Helix 87	AJ6	H	99	103	Right-handed 310
Helix 88	AJ7	H	104	116	Right-handed alpha
Helix 89	AJ8	H	116	134	Right-handed alpha
Helix 90	AJ9	H	154	176	Right-handed alpha
Helix 91	AK1	H	177	179	Right-handed 310
Helix 92	AK2	H	192	197	Right-handed alpha
Helix 93	AK3	H	199	208	Right-handed alpha
Helix 94	AK4	H	217	230	Right-handed alpha
Helix 95	AK5	H	231	234	Right-handed 310
Helix 96	AK6	I	17	30	Right-handed alpha
Helix 97	AK7	I	40	51	Right-handed alpha
Helix 98	AK8	I	67	83	Right-handed alpha
Helix 99	AK9	I	99	103	Right-handed 310
Helix 100	AL1	I	104	116	Right-handed alpha
Helix 101	AL2	I	116	134	Right-handed alpha
Helix 102	AL3	I	154	176	Right-handed alpha
Helix 103	AL4	I	177	179	Right-handed 310
Helix 104	AL5	I	192	197	Right-handed alpha
Helix 105	AL6	I	199	208	Right-handed alpha
Helix 106	AL7	I	217	230	Right-handed alpha
Helix 107	AL8	I	231	234	Right-handed 310
Helix 108	AL9	I	252	257	Right-handed alpha
Helix 109	AM1	J	17	30	Right-handed alpha
Helix 110	AM2	J	40	51	Right-handed alpha
Helix 111	AM3	J	67	83	Right-handed alpha
Helix 112	AM4	J	99	103	Right-handed 310
Helix 113	AM5	J	104	116	Right-handed alpha
Helix 114	AM6	J	116	134	Right-handed alpha
Helix 115	AM7	J	154	176	Right-handed alpha
Helix 116	AM8	J	177	179	Right-handed 310
Helix 117	AM9	J	192	197	Right-handed alpha
Helix 118	AN1	J	199	208	Right-handed alpha
Helix 119	AN2	J	217	230	Right-handed alpha
Helix 120	AN3	J	231	234	Right-handed 310
Helix 121	AN4	K	17	30	Right-handed alpha
Helix 122	AN5	K	40	51	Right-handed alpha
Helix 123	AN6	K	67	83	Right-handed alpha
Helix 124	AN7	K	99	103	Right-handed 310
Helix 125	AN8	K	104	116	Right-handed alpha
Helix 126	AN9	K	116	134	Right-handed alpha
Helix 127	AO1	K	154	176	Right-handed alpha
Helix 128	AO2	K	177	179	Right-handed 310
Helix 129	AO3	K	192	197	Right-handed alpha
Helix 130	AO4	K	198	201	Right-handed 310
Helix 131	AO5	K	202	209	Right-handed alpha
Helix 132	AO6	K	217	230	Right-handed alpha
Helix 133	AO7	K	231	234	Right-handed 310
Helix 134	AO8	L	17	30	Right-handed alpha
Helix 135	AO9	L	40	51	Right-handed alpha
Helix 136	AP1	L	67	83	Right-handed alpha
Helix 137	AP2	L	99	103	Right-handed 310
Helix 138	AP3	L	104	116	Right-handed alpha
Helix 139	AP4	L	116	134	Right-handed alpha
Helix 140	AP5	L	154	176	Right-handed alpha
Helix 141	AP6	L	177	179	Right-handed 310
Helix 142	AP7	L	194	198	Right-handed 310
Helix 143	AP8	L	199	208	Right-handed alpha
Helix 144	AP9	L	217	230	Right-handed alpha
Helix 145	AQ1	L	231	234	Right-handed 310
Helix 146	AQ2	M	17	30	Right-handed alpha
Helix 147	AQ3	M	40	51	Right-handed alpha
Helix 148	AQ4	M	67	83	Right-handed alpha
Helix 149	AQ5	M	99	103	Right-handed 310
Helix 150	AQ6	M	104	116	Right-handed alpha
Helix 151	AQ7	M	116	134	Right-handed alpha
Helix 152	AQ8	M	154	176	Right-handed alpha
Helix 153	AQ9	M	177	179	Right-handed 310
Helix 154	AR1	M	193	197	Right-handed 310
Helix 155	AR2	M	199	208	Right-handed alpha
Helix 156	AR3	M	217	229	Right-handed alpha
Helix 157	AR4	M	230	234	Right-handed 310
Helix 158	AR5	N	17	30	Right-handed alpha
Helix 159	AR6	N	40	51	Right-handed alpha
Helix 160	AR7	N	67	83	Right-handed alpha
Helix 161	AR8	N	99	103	Right-handed 310
Helix 162	AR9	N	104	116	Right-handed alpha
Helix 163	AS1	N	116	133	Right-handed alpha
Helix 164	AS2	N	154	176	Right-handed alpha
Helix 165	AS3	N	192	197	Right-handed alpha
Helix 166	AS4	N	199	208	Right-handed alpha
Helix 167	AS5	N	217	230	Right-handed alpha
Helix 168	AS6	N	231	234	Right-handed 310
Helix 169	AS7	O	17	30	Right-handed alpha
Helix 170	AS8	O	40	51	Right-handed alpha
Helix 171	AS9	O	67	83	Right-handed alpha
Helix 172	AT1	O	104	116	Right-handed alpha
Helix 173	AT2	O	116	134	Right-handed alpha
Helix 174	AT3	O	154	176	Right-handed alpha
Helix 175	AT4	O	177	179	Right-handed 310
Helix 176	AT5	O	192	197	Right-handed alpha
Helix 177	AT6	O	199	208	Right-handed alpha
Helix 178	AT7	O	217	230	Right-handed alpha
Helix 179	AT8	O	231	234	Right-handed 310
Helix 180	AT9	P	17	30	Right-handed alpha
Helix 181	AU1	P	40	51	Right-handed alpha
Helix 182	AU2	P	67	83	Right-handed alpha
Helix 183	AU3	P	99	103	Right-handed 310
Helix 184	AU4	P	104	116	Right-handed alpha
Helix 185	AU5	P	116	126	Right-handed alpha
Helix 186	AU6	P	126	134	Right-handed alpha
Helix 187	AU7	P	154	176	Right-handed alpha
Helix 188	AU8	P	177	179	Right-handed 310
Helix 189	AU9	P	192	197	Right-handed alpha
Helix 190	AV1	P	199	208	Right-handed alpha
Helix 191	AV2	P	217	230	Right-handed alpha
Helix 192	AV3	P	231	234	Right-handed 310

There are 16 sheets in PDB entry 6CI9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	62	first strand
Strand 2	A	33	38	parallel
Strand 3	A	9	12	parallel
Strand 4	A	87	90	parallel
Strand 5	A	137	141	parallel
Strand 6	A	181	187	parallel
Strand 7	A	240	243	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	62	first strand
Strand 2	B	33	38	parallel
Strand 3	B	9	12	parallel
Strand 4	B	87	90	parallel
Strand 5	B	137	141	parallel
Strand 6	B	181	187	parallel
Strand 7	B	240	243	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	62	first strand
Strand 2	C	33	38	parallel
Strand 3	C	9	12	parallel
Strand 4	C	87	90	parallel
Strand 5	C	137	141	parallel
Strand 6	C	181	187	parallel
Strand 7	C	240	243	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	62	first strand
Strand 2	D	33	38	parallel
Strand 3	D	9	12	parallel
Strand 4	D	87	90	parallel
Strand 5	D	137	141	parallel
Strand 6	D	181	187	parallel
Strand 7	D	240	243	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	62	first strand
Strand 2	E	33	38	parallel
Strand 3	E	9	12	parallel
Strand 4	E	87	90	parallel
Strand 5	E	137	141	parallel
Strand 6	E	181	187	parallel
Strand 7	E	240	243	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	62	first strand
Strand 2	F	33	38	parallel
Strand 3	F	9	12	parallel
Strand 4	F	87	90	parallel
Strand 5	F	136	141	parallel
Strand 6	F	180	187	parallel
Strand 7	F	240	243	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	58	62	first strand
Strand 2	G	33	38	parallel
Strand 3	G	9	12	parallel
Strand 4	G	87	90	parallel
Strand 5	G	137	141	parallel
Strand 6	G	181	187	parallel
Strand 7	G	240	243	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	58	62	first strand
Strand 2	H	33	38	parallel
Strand 3	H	9	12	parallel
Strand 4	H	87	90	parallel
Strand 5	H	137	141	parallel
Strand 6	H	181	187	parallel
Strand 7	H	240	243	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	58	62	first strand
Strand 2	I	33	38	parallel
Strand 3	I	9	12	parallel
Strand 4	I	87	90	parallel
Strand 5	I	137	141	parallel
Strand 6	I	181	187	parallel
Strand 7	I	240	243	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	58	62	first strand
Strand 2	J	33	38	parallel
Strand 3	J	9	12	parallel
Strand 4	J	87	90	parallel
Strand 5	J	137	141	parallel
Strand 6	J	181	187	parallel
Strand 7	J	240	243	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	58	62	first strand
Strand 2	K	33	38	parallel
Strand 3	K	9	12	parallel
Strand 4	K	87	90	parallel
Strand 5	K	137	141	parallel
Strand 6	K	181	187	parallel
Strand 7	K	240	243	parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	58	62	first strand
Strand 2	L	33	38	parallel
Strand 3	L	9	12	parallel
Strand 4	L	87	90	parallel
Strand 5	L	137	141	parallel
Strand 6	L	181	187	parallel
Strand 7	L	240	243	parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	58	62	first strand
Strand 2	M	33	38	parallel
Strand 3	M	9	12	parallel
Strand 4	M	87	90	parallel
Strand 5	M	137	141	parallel
Strand 6	M	181	187	parallel
Strand 7	M	240	243	parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	58	62	first strand
Strand 2	N	33	38	parallel
Strand 3	N	9	12	parallel
Strand 4	N	87	90	parallel
Strand 5	N	137	141	parallel
Strand 6	N	181	187	parallel
Strand 7	N	240	243	parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	58	62	first strand
Strand 2	O	33	38	parallel
Strand 3	O	9	12	parallel
Strand 4	O	87	90	parallel
Strand 5	O	137	141	parallel
Strand 6	O	181	187	parallel
Strand 7	O	240	243	parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	58	62	first strand
Strand 2	P	33	38	parallel
Strand 3	P	9	12	parallel
Strand 4	P	87	90	parallel
Strand 5	P	137	141	parallel
Strand 6	P	181	187	parallel
Strand 7	P	240	243	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6CI9

Analysis of interatomic Contacts of Structural Units in PDB entry:
6CI9