Analysis of interatomic Contacts of Structural Units in PDB entry:
6CIG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CIG entry

There are 2 chains in PDB entry 6CIG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4GLU 116
A
 VAL 118PRO 352
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6CIG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 25Right-handed alpha
Helix 2
AA2
A
26 39Right-handed alpha
Helix 3
AA3
A
40 49Right-handed alpha
Helix 4
AA4
A
54 62Right-handed alpha
Helix 5
AA5
A
64 66Right-handed 310
Helix 6
AA6
A
67 81Right-handed alpha
Helix 7
AA7
A
97 102Right-handed alpha
Helix 8
AA8
A
111 119Right-handed alpha
Helix 9
AA9
A
120 126Right-handed alpha
Helix 10
AB1
A
129 135Right-handed alpha
Helix 11
AB2
A
140 147Right-handed alpha
Helix 12
AB3
A
149 157Right-handed alpha
Helix 13
AB4
A
157 171Right-handed alpha
Helix 14
AB5
A
171 181Right-handed alpha
Helix 15
AB6
A
182 187Right-handed alpha
Helix 16
AB7
A
200 210Right-handed alpha
Helix 17
AB8
A
220 225Right-handed alpha
Helix 18
AB9
A
255 259Right-handed 310
Helix 19
AC1
A
260 276Right-handed alpha
Helix 20
AC2
A
277 280Right-handed 310
Helix 21
AC3
A
297 311Right-handed alpha
Helix 22
AC4
A
312 315Right-handed 310
Helix 23
AC5
A
321 331Right-handed alpha
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There are 3 sheets in PDB entry 6CIG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
92 96anti-parallel
Strand 3
A
84 88anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 237first strand
Strand 2
A
214 219parallel
Strand 3
A
191 195parallel
Strand 4
A
249 253parallel
Strand 5
A
283 288parallel
Strand 6
A
345 351anti-parallel
Strand 7
A
335 342anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 291first strand
Strand 2
A
319 320parallel
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