Analysis of interatomic Contacts of Structural Units in PDB entry:
6CJS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CJS entry

There is 1 chain in PDB entry 6CJS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 1LYS 218
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6CJS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 10Right-handed 310
Helix 2
AA2
A
11 27Right-handed alpha
Helix 3
AA3
A
31 55Right-handed alpha
Helix 4
AA4
A
56 60Right-handed 310
Helix 5
AA5
A
88 114Right-handed alpha
Helix 6
AA6
A
116 122Right-handed 310
Helix 7
AA7
A
124 129Right-handed alpha
Helix 8
AA8
A
130 132Right-handed 310
Helix 9
AA9
A
182 188Right-handed 310
Helix 10
AB1
A
189 201Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6CJS.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
149 152anti-parallel
Strand 3
A
134 142anti-parallel
Strand 4
A
173 180anti-parallel
Strand 5
A
77 82anti-parallel
Strand 6
A
67 72anti-parallel
Strand 7
A
208 210parallel
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