Analysis of interatomic Contacts of Structural Units in PDB entry:
6CKG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CKG entry

There are 2 chains in PDB entry 6CKG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1PHE 314
B
 GLY 1PHE 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6CKG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 23Right-handed alpha
Helix 2
AA2
A
46 60Right-handed alpha
Helix 3
AA3
A
69 72Right-handed 310
Helix 4
AA4
A
74 85Right-handed alpha
Helix 5
AA5
A
88 92Right-handed 310
Helix 6
AA6
A
101 114Right-handed alpha
Helix 7
AA7
A
140 144Right-handed 310
Helix 8
AA8
A
174 189Right-handed alpha
Helix 9
AA9
A
202 207Right-handed 310
Helix 10
AB1
A
208 221Right-handed alpha
Helix 11
AB2
A
222 227Right-handed alpha
Helix 12
AB3
A
241 258Right-handed alpha
Helix 13
AB4
A
264 283Right-handed alpha
Helix 14
AB5
A
284 287Right-handed 310
Helix 15
AB6
B
2 23Right-handed alpha
Helix 16
AB7
B
46 60Right-handed alpha
Helix 17
AB8
B
69 72Right-handed 310
Helix 18
AB9
B
74 85Right-handed alpha
Helix 19
AC1
B
88 92Right-handed 310
Helix 20
AC2
B
101 114Right-handed alpha
Helix 21
AC3
B
174 189Right-handed alpha
Helix 22
AC4
B
202 207Right-handed 310
Helix 23
AC5
B
208 221Right-handed alpha
Helix 24
AC6
B
222 227Right-handed alpha
Helix 25
AC7
B
241 259Right-handed alpha
Helix 26
AC8
B
264 274Right-handed alpha
Helix 27
AC9
B
275 283Right-handed alpha
Helix 28
AD1
B
284 287Right-handed 310
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There are 4 sheets in PDB entry 6CKG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 67first strand
Strand 2
A
160 164parallel
Strand 3
A
32 37parallel
Strand 4
A
231 237parallel
Strand 5
A
297 302parallel
Strand 6
A
308 314anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 137first strand
Strand 2
A
146 155anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 67first strand
Strand 2
B
160 164parallel
Strand 3
B
32 37parallel
Strand 4
B
231 237parallel
Strand 5
B
297 302parallel
Strand 6
B
308 313anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 137first strand
Strand 2
B
146 155anti-parallel
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