Analysis of interatomic Contacts of Structural Units in PDB entry:
6CL6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6CL6 entry

There are 2 chains in PDB entry 6CL6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 328	ARG 691
B	ALA 328	PHE 635

There are 71 helices in PDB entry 6CL6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	330	334	Right-handed 310
Helix 2	AA2	A	348	352	Right-handed 310
Helix 3	AA3	A	353	358	Right-handed 310
Helix 4	AA4	A	368	372	Right-handed 310
Helix 5	AA5	A	440	444	Right-handed 310
Helix 6	AA6	A	458	462	Right-handed 310
Helix 7	AA7	A	472	479	Right-handed alpha
Helix 8	AA8	A	535	539	Right-handed 310
Helix 9	AA9	A	541	545	Right-handed 310
Helix 10	AB1	A	546	550	Right-handed 310
Helix 11	AB2	A	575	579	Right-handed 310
Helix 12	AB3	A	585	594	Right-handed alpha
Helix 13	AB4	B	330	334	Right-handed 310
Helix 14	AB5	B	348	352	Right-handed 310
Helix 15	AB6	B	353	358	Right-handed 310
Helix 16	AB7	B	368	372	Right-handed 310
Helix 17	AB8	B	440	444	Right-handed 310
Helix 18	AB9	B	458	462	Right-handed 310
Helix 19	AC1	B	472	479	Right-handed alpha
Helix 20	AC2	B	535	539	Right-handed 310
Helix 21	AC3	B	541	545	Right-handed 310
Helix 22	AC4	B	546	550	Right-handed 310
Helix 23	AC5	B	575	579	Right-handed 310
Helix 24	AC6	B	585	594	Right-handed alpha
Helix 25	AC7	C	330	334	Right-handed 310
Helix 26	AC8	C	348	352	Right-handed 310
Helix 27	AC9	C	353	358	Right-handed 310
Helix 28	AD1	C	368	372	Right-handed 310
Helix 29	AD2	C	440	444	Right-handed 310
Helix 30	AD3	C	458	462	Right-handed 310
Helix 31	AD4	C	472	478	Right-handed alpha
Helix 32	AD5	C	535	539	Right-handed 310
Helix 33	AD6	C	541	545	Right-handed 310
Helix 34	AD7	C	575	579	Right-handed 310
Helix 35	AD8	C	585	594	Right-handed alpha
Helix 36	AD9	D	330	334	Right-handed 310
Helix 37	AE1	D	348	352	Right-handed 310
Helix 38	AE2	D	353	358	Right-handed 310
Helix 39	AE3	D	368	372	Right-handed 310
Helix 40	AE4	D	440	444	Right-handed 310
Helix 41	AE5	D	458	462	Right-handed 310
Helix 42	AE6	D	472	478	Right-handed alpha
Helix 43	AE7	D	535	539	Right-handed 310
Helix 44	AE8	D	541	545	Right-handed 310
Helix 45	AE9	D	546	550	Right-handed 310
Helix 46	AF1	D	575	579	Right-handed 310
Helix 47	AF2	D	585	594	Right-handed alpha
Helix 48	AF3	E	330	334	Right-handed 310
Helix 49	AF4	E	348	352	Right-handed 310
Helix 50	AF5	E	353	358	Right-handed 310
Helix 51	AF6	E	368	372	Right-handed 310
Helix 52	AF7	E	440	444	Right-handed 310
Helix 53	AF8	E	458	462	Right-handed 310
Helix 54	AF9	E	472	478	Right-handed alpha
Helix 55	AG1	E	535	539	Right-handed 310
Helix 56	AG2	E	541	545	Right-handed 310
Helix 57	AG3	E	546	550	Right-handed 310
Helix 58	AG4	E	575	579	Right-handed 310
Helix 59	AG5	E	585	594	Right-handed alpha
Helix 60	AG6	F	330	334	Right-handed 310
Helix 61	AG7	F	348	352	Right-handed 310
Helix 62	AG8	F	353	358	Right-handed 310
Helix 63	AG9	F	368	372	Right-handed 310
Helix 64	AH1	F	440	444	Right-handed 310
Helix 65	AH2	F	458	462	Right-handed 310
Helix 66	AH3	F	472	478	Right-handed alpha
Helix 67	AH4	F	535	539	Right-handed 310
Helix 68	AH5	F	541	545	Right-handed 310
Helix 69	AH6	F	546	550	Right-handed 310
Helix 70	AH7	F	575	579	Right-handed 310
Helix 71	AH8	F	585	594	Right-handed alpha

There are 42 sheets in PDB entry 6CL6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	337	338	first strand
Strand 2	B	342	344	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	342	344	first strand
Strand 2	C	337	338	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	379	first strand
Strand 2	A	391	398	anti-parallel
Strand 3	A	404	411	anti-parallel
Strand 4	A	418	423	anti-parallel
Strand 5	A	437	438	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	452	first strand
Strand 2	A	466	470	parallel
Strand 3	A	488	496	anti-parallel
Strand 4	A	499	506	anti-parallel
Strand 5	A	512	518	anti-parallel
Strand 6	A	521	522	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	452	first strand
Strand 2	A	466	470	parallel
Strand 3	A	488	496	anti-parallel
Strand 4	A	499	506	anti-parallel
Strand 5	A	512	518	anti-parallel
Strand 6	A	526	527	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	564	565	first strand
Strand 2	B	569	571	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	569	571	first strand
Strand 2	C	564	565	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	600	602	first strand
Strand 2	A	607	610	anti-parallel
Strand 3	A	617	625	anti-parallel
Strand 4	A	682	691	anti-parallel
Strand 5	A	642	650	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	629	634	first strand
Strand 2	A	671	676	anti-parallel
Strand 3	A	662	665	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	337	338	first strand
Strand 2	C	342	344	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	379	first strand
Strand 2	B	391	398	anti-parallel
Strand 3	B	404	411	anti-parallel
Strand 4	B	418	423	anti-parallel
Strand 5	B	437	438	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	451	452	first strand
Strand 2	B	466	470	parallel
Strand 3	B	488	496	anti-parallel
Strand 4	B	499	506	anti-parallel
Strand 5	B	512	518	anti-parallel
Strand 6	B	521	522	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	451	452	first strand
Strand 2	B	466	470	parallel
Strand 3	B	488	496	anti-parallel
Strand 4	B	499	506	anti-parallel
Strand 5	B	512	518	anti-parallel
Strand 6	B	526	527	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	564	565	first strand
Strand 2	C	569	571	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	600	602	first strand
Strand 2	B	607	610	anti-parallel
Strand 3	B	617	625	anti-parallel
Strand 4	B	682	690	anti-parallel
Strand 5	B	643	650	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	629	634	first strand
Strand 2	B	671	676	anti-parallel
Strand 3	B	662	665	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	376	379	first strand
Strand 2	C	391	398	anti-parallel
Strand 3	C	404	411	anti-parallel
Strand 4	C	418	423	anti-parallel
Strand 5	C	437	438	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	452	first strand
Strand 2	C	466	470	parallel
Strand 3	C	488	496	anti-parallel
Strand 4	C	499	506	anti-parallel
Strand 5	C	512	518	anti-parallel
Strand 6	C	521	522	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	452	first strand
Strand 2	C	466	470	parallel
Strand 3	C	488	496	anti-parallel
Strand 4	C	499	506	anti-parallel
Strand 5	C	512	518	anti-parallel
Strand 6	C	526	527	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	600	602	first strand
Strand 2	C	607	610	anti-parallel
Strand 3	C	617	625	anti-parallel
Strand 4	C	682	691	anti-parallel
Strand 5	C	642	650	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	629	634	first strand
Strand 2	C	671	676	anti-parallel
Strand 3	C	662	665	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	337	338	first strand
Strand 2	E	342	344	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	342	344	first strand
Strand 2	F	337	338	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	376	379	first strand
Strand 2	D	391	398	anti-parallel
Strand 3	D	404	411	anti-parallel
Strand 4	D	418	423	anti-parallel
Strand 5	D	437	438	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	451	452	first strand
Strand 2	D	466	470	parallel
Strand 3	D	488	496	anti-parallel
Strand 4	D	499	506	anti-parallel
Strand 5	D	512	518	anti-parallel
Strand 6	D	521	522	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	451	452	first strand
Strand 2	D	466	470	parallel
Strand 3	D	488	496	anti-parallel
Strand 4	D	499	506	anti-parallel
Strand 5	D	512	518	anti-parallel
Strand 6	D	526	527	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	564	565	first strand
Strand 2	E	569	571	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	569	571	first strand
Strand 2	F	564	565	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	600	602	first strand
Strand 2	D	607	611	anti-parallel
Strand 3	D	616	625	anti-parallel
Strand 4	D	682	691	anti-parallel
Strand 5	D	642	650	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	629	634	first strand
Strand 2	D	671	676	anti-parallel
Strand 3	D	662	665	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	337	338	first strand
Strand 2	F	342	344	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	376	379	first strand
Strand 2	E	391	398	anti-parallel
Strand 3	E	404	411	anti-parallel
Strand 4	E	418	423	anti-parallel
Strand 5	E	437	438	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	451	452	first strand
Strand 2	E	466	470	parallel
Strand 3	E	488	496	anti-parallel
Strand 4	E	499	506	anti-parallel
Strand 5	E	512	518	anti-parallel
Strand 6	E	521	522	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	451	452	first strand
Strand 2	E	466	470	parallel
Strand 3	E	488	496	anti-parallel
Strand 4	E	499	506	anti-parallel
Strand 5	E	512	518	anti-parallel
Strand 6	E	526	527	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	564	565	first strand
Strand 2	F	569	571	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	600	602	first strand
Strand 2	E	607	610	anti-parallel
Strand 3	E	617	625	anti-parallel
Strand 4	E	682	690	anti-parallel
Strand 5	E	643	650	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	629	634	first strand
Strand 2	E	671	676	anti-parallel
Strand 3	E	662	665	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	376	379	first strand
Strand 2	F	391	398	anti-parallel
Strand 3	F	404	411	anti-parallel
Strand 4	F	418	423	anti-parallel
Strand 5	F	437	438	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	451	452	first strand
Strand 2	F	466	470	parallel
Strand 3	F	488	496	anti-parallel
Strand 4	F	499	506	anti-parallel
Strand 5	F	512	518	anti-parallel
Strand 6	F	521	522	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	451	452	first strand
Strand 2	F	466	470	parallel
Strand 3	F	488	496	anti-parallel
Strand 4	F	499	506	anti-parallel
Strand 5	F	512	518	anti-parallel
Strand 6	F	526	527	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	600	602	first strand
Strand 2	F	607	610	anti-parallel
Strand 3	F	617	625	anti-parallel
Strand 4	F	682	691	anti-parallel
Strand 5	F	642	650	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	629	634	first strand
Strand 2	F	671	676	anti-parallel
Strand 3	F	662	665	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6CL6

Analysis of interatomic Contacts of Structural Units in PDB entry:
6CL6