Analysis of interatomic Contacts of Structural Units in PDB entry:
6CM4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CM4 entry

There is 1 chain in PDB entry 6CM4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 35HIS 442
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6CM4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 62Right-handed alpha
Helix 2
AA2
A
63 66Right-handed 310
Helix 3
AA3
A
67 87Right-handed alpha
Helix 4
AA4
A
87 98Right-handed alpha
Helix 5
AA5
A
103 138Right-handed alpha
Helix 6
AA6
A
146 168Right-handed alpha
Helix 7
AA7
A
169 176Right-handed 310
Helix 8
AA8
A
182 186Right-handed 310
Helix 9
AA9
A
188 196Right-handed alpha
Helix 10
AB1
A
198 1011Right-handed alpha
Helix 11
AB2
A
1038 1051Right-handed alpha
Helix 12
AB3
A
1059 1081Right-handed alpha
Helix 13
AB4
A
1084 1091Right-handed alpha
Helix 14
AB5
A
1092 1112Right-handed alpha
Helix 15
AB6
A
1114 1123Right-handed alpha
Helix 16
AB7
A
1125 1134Right-handed alpha
Helix 17
AB8
A
1136 1142Right-handed alpha
Helix 18
AB9
A
1142 1156Right-handed alpha
Helix 19
AC1
A
368 399Right-handed alpha
Helix 20
AC2
A
404 418Right-handed alpha
Helix 21
AC3
A
421 430Right-handed alpha
Helix 22
AC4
A
430 441Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6CM4.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1014 1019first strand
Strand 2
A
1025 1028anti-parallel
Strand 3
A
1031 1034anti-parallel
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