Analysis of interatomic Contacts of Structural Units in PDB entry:
6CMX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6CMX entry

There is 1 chain in PDB entry 6CMX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 905GLU 2644
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6CMX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
955 957Right-handed 310
Helix 2
AA2
A
2318 2323Right-handed alpha
Helix 3
AA3
A
2334 2338Right-handed 310
Helix 4
AA4
A
2345 2349Right-handed 310
Helix 5
AA5
A
2352 2360Right-handed alpha
Helix 6
AA6
A
2382 2390Right-handed alpha
Helix 7
AA7
A
2398 2412Right-handed alpha
Helix 8
AA8
A
2464 2475Right-handed alpha
Helix 9
AA9
A
2559 2591Right-handed alpha
Helix 10
AB1
A
2603 2610Right-handed alpha
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There are 26 sheets in PDB entry 6CMX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
911 914first strand
Strand 2
A
964 969anti-parallel
Strand 3
A
1001 1004anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
930 931first strand
Strand 2
A
936 942anti-parallel
Strand 3
A
949 953anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
980 981first strand
Strand 2
A
994 995anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
984 985first strand
Strand 2
A
1020 1027anti-parallel
Strand 3
A
1041 1048anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1067 1068first strand
Strand 2
A
1075 1076anti-parallel
Strand 3
A
1082 1083anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1457 1461first strand
Strand 2
A
1466 1470anti-parallel
Strand 3
A
1476 1481anti-parallel
Strand 4
A
1487 1493anti-parallel
Strand 5
A
1499 1504anti-parallel
Strand 6
A
1507 1511anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1522 1524first strand
Strand 2
A
1530 1534anti-parallel
Strand 3
A
1543 1545anti-parallel
Strand 4
A
1550 1553anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1555 1556first strand
Strand 2
A
1563 1564anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1607 1608first strand
Strand 2
A
1619 1624anti-parallel
Strand 3
A
1628 1634anti-parallel
Strand 4
A
1644 1645anti-parallel
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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1652 1653first strand
Strand 2
A
1659 1662anti-parallel
Strand 3
A
1677 1683anti-parallel
Strand 4
A
1692 1702anti-parallel
Strand 5
A
1705 1715anti-parallel
Strand 6
A
1718 1726anti-parallel
Strand 7
A
1734 1736anti-parallel
Strand 8
A
1742 1744anti-parallel
Strand 9
A
1757 1758anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1765 1766first strand
Strand 2
A
1777 1780anti-parallel
Strand 3
A
1783 1789anti-parallel
Strand 4
A
1795 1800anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1807 1809first strand
Strand 2
A
1816 1818anti-parallel
Strand 3
A
1824 1829anti-parallel
Strand 4
A
1835 1839anti-parallel
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There are 12 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1848 1853first strand
Strand 2
A
1856 1861anti-parallel
Strand 3
A
1870 1874anti-parallel
Strand 4
A
1880 1885anti-parallel
Strand 5
A
1890 1896anti-parallel
Strand 6
A
1902 1907anti-parallel
Strand 7
A
1910 1916anti-parallel
Strand 8
A
1923 1930anti-parallel
Strand 9
A
1936 1941anti-parallel
Strand 10
A
1946 1950anti-parallel
Strand 11
A
1961 1967anti-parallel
Strand 12
A
1974 1977anti-parallel
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There are 13 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1848 1853first strand
Strand 2
A
1856 1861anti-parallel
Strand 3
A
1870 1874anti-parallel
Strand 4
A
1880 1885anti-parallel
Strand 5
A
1890 1896anti-parallel
Strand 6
A
1902 1907anti-parallel
Strand 7
A
1910 1916anti-parallel
Strand 8
A
1923 1930anti-parallel
Strand 9
A
1936 1941anti-parallel
Strand 10
A
1946 1950anti-parallel
Strand 11
A
1961 1967anti-parallel
Strand 12
A
1980 1981anti-parallel
Strand 13
A
1984 1985anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1992 1993first strand
Strand 2
A
2000 2001anti-parallel
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There are 9 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2007 2011first strand
Strand 2
A
2014 2018anti-parallel
Strand 3
A
2023 2028anti-parallel
Strand 4
A
2034 2038anti-parallel
Strand 5
A
2048 2054anti-parallel
Strand 6
A
2057 2065anti-parallel
Strand 7
A
2073 2079anti-parallel
Strand 8
A
2085 2090anti-parallel
Strand 9
A
2094 2097anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2108 2109first strand
Strand 2
A
2118 2119anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2130 2131first strand
Strand 2
A
2134 2135anti-parallel
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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2150 2151first strand
Strand 2
A
2163 2165anti-parallel
Strand 3
A
2171 2176anti-parallel
Strand 4
A
2182 2187anti-parallel
Strand 5
A
2192 2194anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2219 2222first strand
Strand 2
A
2228 2232anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2240 2243first strand
Strand 2
A
2249 2253anti-parallel
Strand 3
A
2259 2261anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2264 2266first strand
Strand 2
A
2269 2273anti-parallel
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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2289 2290first strand
Strand 2
A
2297 2299anti-parallel
Strand 3
A
2302 2303anti-parallel
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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2449 2450first strand
Strand 2
A
2454 2456anti-parallel
Strand 3
A
2477 2478anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2485 2487first strand
Strand 2
A
2490 2492anti-parallel
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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2618 2620first strand
Strand 2
A
2637 2639anti-parallel
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