Analysis of interatomic Contacts of Structural Units in PDB entry:
6COZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6COZ entry

There are 2 chains in PDB entry 6COZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 591SER 876
B
 PRO 591SER 876
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6COZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
604 609Right-handed alpha
Helix 2
AA2
A
621 632Right-handed alpha
Helix 3
AA3
A
654 666Right-handed alpha
Helix 4
AA4
A
798 811Right-handed alpha
Helix 5
AA5
A
830 832Right-handed 310
Helix 6
AA6
A
833 844Right-handed alpha
Helix 7
AA7
A
862 876Right-handed alpha
Helix 8
AA8
B
604 609Right-handed alpha
Helix 9
AA9
B
621 632Right-handed alpha
Helix 10
AB1
B
654 666Right-handed alpha
Helix 11
AB2
B
798 811Right-handed alpha
Helix 12
AB3
B
830 832Right-handed 310
Helix 13
AB4
B
833 844Right-handed alpha
Helix 14
AB5
B
862 876Right-handed alpha
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There are 4 sheets in PDB entry 6COZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 617first strand
Strand 2
A
636 640parallel
Strand 3
A
648 653anti-parallel
Strand 4
A
821 822anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
851 853first strand
Strand 2
A
856 859anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
616 617first strand
Strand 2
B
636 640parallel
Strand 3
B
648 653anti-parallel
Strand 4
B
821 822anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
851 853first strand
Strand 2
B
856 859anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il